RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 CSNK2BP67870 215 aa14.26□□□□□ -0.13
RNF40-206ENST00000564260 MRPL28Q13084 256 aaKnown RBP14.26□□□□□ -0.13
RNF40-206ENST00000564260 GK2Q14410 553 aaPredicted RBP14.26□□□□□ -0.13
RNF40-206ENST00000564260 LRRN1Q6UXK5 716 aa14.26□□□□□ -0.13
RNF40-206ENST00000564260 MRPL21Q7Z2W9 205 aaKnown RBP14.26□□□□□ -0.13
RNF40-206ENST00000564260 KLBQ86Z14 1044 aa14.26□□□□□ -0.13
RNF40-206ENST00000564260 FTMTQ8N4E7 242 aa14.26□□□□□ -0.13
RNF40-206ENST00000564260 ACBD7Q8N6N7 88 aa14.26□□□□□ -0.13
RNF40-206ENST00000564260 ZNF540Q8NDQ6 660 aa14.26□□□□□ -0.13
RNF40-206ENST00000564260 SORCS2Q96PQ0 1159 aa14.26□□□□□ -0.13
RNF40-206ENST00000564260 VRK1Q99986 396 aaPredicted RBP14.26□□□□□ -0.13
RNF40-206ENST00000564260 JAM3Q9BX67 310 aa14.26□□□□□ -0.13
RNF40-206ENST00000564260 RASSF4Q9H2L5 321 aa14.26□□□□□ -0.13
RNF40-206ENST00000564260 MYEF2Q9P2K5 600 aaKnown RBP14.26□□□□□ -0.13
RNF40-206ENST00000564260 FZR1Q9UM11 496 aa14.26□□□□□ -0.13
RNF40-206ENST00000564260 COPS3Q9UNS2 423 aa14.26□□□□□ -0.13
RNF40-206ENST00000564260 KLHDC2Q9Y2U9 406 aa14.26□□□□□ -0.13
RNF40-206ENST00000564260 MYO9AB2RTY4 2548 aa14.26□□□□□ -0.13
RNF40-206ENST00000564260 CREBBPQ92793 2442 aa14.25□□□□□ -0.13
RNF40-206ENST00000564260 A0A1W2PQL4 384 aaPredicted RBP14.25□□□□□ -0.13
RNF40-206ENST00000564260 ANXA2P07355 339 aaKnown RBP14.25□□□□□ -0.13
RNF40-206ENST00000564260 ALDH3B1P43353 468 aa14.25□□□□□ -0.13
RNF40-206ENST00000564260 CDK5R2Q13319 367 aa14.25□□□□□ -0.13
RNF40-206ENST00000564260 SNAI3Q3KNW1 292 aa14.25□□□□□ -0.13
RNF40-206ENST00000564260 CLEC2AQ6UVW9 174 aa14.25□□□□□ -0.13
RNF40-206ENST00000564260 KRTAP1-3Q8IUG1 177 aa14.25□□□□□ -0.13
RNF40-206ENST00000564260 CCDC54Q8NEL0 328 aa14.25□□□□□ -0.13
RNF40-206ENST00000564260 OR8G5Q8NG78 346 aa14.25□□□□□ -0.13
RNF40-206ENST00000564260 OR10H4Q8NGA5 316 aa14.25□□□□□ -0.13
RNF40-206ENST00000564260 OR13G1Q8NGZ3 307 aa14.25□□□□□ -0.13
RNF40-206ENST00000564260 FBLIM1Q8WUP2 373 aa14.25□□□□□ -0.13
RNF40-206ENST00000564260 APH1BQ8WW43 257 aa14.25□□□□□ -0.13
RNF40-206ENST00000564260 NRG4Q8WWG1 115 aa14.25□□□□□ -0.13
RNF40-206ENST00000564260 EGLN1Q9GZT9 426 aa14.25□□□□□ -0.13
RNF40-206ENST00000564260 PTTG3PQ9NZH4 202 aa14.25□□□□□ -0.13
RNF40-206ENST00000564260 MRPL15Q9P015 296 aaKnown RBP14.25□□□□□ -0.13
RNF40-206ENST00000564260 NUFIP1Q9UHK0 495 aaKnown RBP14.25□□□□□ -0.13
RNF40-206ENST00000564260 ITGB1BP2Q9UKP3 347 aa14.25□□□□□ -0.13
RNF40-206ENST00000564260 IKZF2Q9UKS7 526 aa14.25□□□□□ -0.13
RNF40-206ENST00000564260 RRP15Q9Y3B9 282 aaKnown RBP14.25□□□□□ -0.13
RNF40-206ENST00000564260 TMEM269A0A1B0GVZ9 245 aa14.24□□□□□ -0.13
RNF40-206ENST00000564260 LOC390937A0A1W2PQ73 354 aa14.24□□□□□ -0.13
RNF40-206ENST00000564260 METTL15A6NJ78 407 aa14.24□□□□□ -0.13
RNF40-206ENST00000564260 WBP4O75554 376 aaKnown RBP14.24□□□□□ -0.13
RNF40-206ENST00000564260 IGHA1P01876 353 aa14.24□□□□□ -0.13
RNF40-206ENST00000564260 DCKP27707 260 aa14.24□□□□□ -0.13
RNF40-206ENST00000564260 TIGD6Q17RP2 521 aa14.24□□□□□ -0.13
RNF40-206ENST00000564260 ZNF684Q5T5D7 378 aa14.24□□□□□ -0.13
RNF40-206ENST00000564260 SPATC1Q76KD6 591 aa14.24□□□□□ -0.13
RNF40-206ENST00000564260 FAM220AQ7Z4H9 259 aa14.24□□□□□ -0.13
RNF40-206ENST00000564260 THAP5Q7Z6K1 395 aa14.24□□□□□ -0.13
RNF40-206ENST00000564260 NAA40Q86UY6 237 aa14.24□□□□□ -0.13
RNF40-206ENST00000564260 TGIF2LYQ8IUE0 185 aa14.24□□□□□ -0.13
RNF40-206ENST00000564260 CSNK2A3Q8NEV1 391 aa14.24□□□□□ -0.13
RNF40-206ENST00000564260 LGALS12Q96DT0 336 aa14.24□□□□□ -0.13
RNF40-206ENST00000564260 PGAM5Q96HS1 289 aa14.24□□□□□ -0.13
RNF40-206ENST00000564260 SLC30A2Q9BRI3 323 aa14.24□□□□□ -0.13
RNF40-206ENST00000564260 POFUT1Q9H488 388 aa14.24□□□□□ -0.13
RNF40-206ENST00000564260 ABCB9Q9NP78 766 aa14.24□□□□□ -0.13
RNF40-206ENST00000564260 DLL4Q9NR61 685 aa14.24□□□□□ -0.13
RNF40-206ENST00000564260 FAM206AQ9NX38 181 aa14.24□□□□□ -0.13
RNF40-206ENST00000564260 SNX5Q9Y5X3 404 aa14.24□□□□□ -0.13
RNF40-206ENST00000564260 R4GMQ9 66 aa14.24□□□□□ -0.13
RNF40-206ENST00000564260 DAPL1A0PJW8 107 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 DHRS7CA6NNS2 312 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 IFNL4K9M1U5 179 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 PIPP12273 146 aaPredicted RBP14.23□□□□□ -0.13
RNF40-206ENST00000564260 FOSL1P15407 271 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 SLC25A16P16260 332 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 TNFRSF1AP19438 455 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 PDLIM4P50479 330 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 HCCSP53701 268 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 ZNF92Q03936 586 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 MZT1Q08AG7 82 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 MED21Q13503 144 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 CLEC12BQ2HXU8 276 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 CDONQ4KMG0 1287 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 GLYATL3Q5SZD4 288 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 KRT74Q7RTS7 529 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 SYS1Q8N2H4 156 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 ZNF786Q8N393 782 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 CELF2-AS1Q8N7Q2 184 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 SPERTQ8NA61 448 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 SPRYD4Q8WW59 207 aaPredicted RBP14.23□□□□□ -0.13
RNF40-206ENST00000564260 REEP6Q96HR9 211 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 RHNO1Q9BSD3 238 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 FGF20Q9NP95 211 aaPredicted RBP14.23□□□□□ -0.13
RNF40-206ENST00000564260 DECR2Q9NUI1 292 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 PLCXD1Q9NUJ7 323 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 CNOT2Q9NZN8 540 aaKnown RBP14.23□□□□□ -0.13
RNF40-206ENST00000564260 IL19Q9UHD0 177 aa14.23□□□□□ -0.13
RNF40-206ENST00000564260 MRM2Q9UI43 246 aaKnown RBP14.23□□□□□ -0.13
RNF40-206ENST00000564260 PRRC2AP48634 2157 aaKnown RBP14.23□□□□□ -0.13
RNF40-206ENST00000564260 CD300LBA8K4G0 201 aa14.22□□□□□ -0.13
RNF40-206ENST00000564260 GMDSO60547 372 aa14.22□□□□□ -0.13
RNF40-206ENST00000564260 IGHV1-46P01743 117 aa14.22□□□□□ -0.13
RNF40-206ENST00000564260 NAT2P11245 290 aa14.22□□□□□ -0.13
RNF40-206ENST00000564260 DAOP14920 347 aa14.22□□□□□ -0.13
RNF40-206ENST00000564260 ACHEP22303 614 aa14.22□□□□□ -0.13
RNF40-206ENST00000564260 GIFP27352 417 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms