RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 BRD3OSQ6XYD6 125 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 SKA3Q8IX90 412 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 SLC37A3Q8NCC5 494 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 OR10S1Q8NGN2 331 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 C11orf40Q8WZ69 217 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 PLEKHA8Q96JA3 519 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 DIRC2Q96SL1 478 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 DDOQ99489 341 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 SLC29A1Q99808 456 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 NUAK2Q9H093 628 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 RIBC2Q9H4K1 309 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 RERGLQ9H628 205 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 SRA1Q9HD15 236 aaKnown RBP13.33□□□□□ -0.28
RNF40-205ENST00000563909 RPRD1BQ9NQG5 326 aaKnown RBP13.33□□□□□ -0.28
RNF40-205ENST00000563909 DNAH3Q8TD57 4116 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 OR6C68A6NDL8 312 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 ZAR1LA6NP61 321 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 CASQ2O14958 399 aaPredicted RBP13.32□□□□□ -0.28
RNF40-205ENST00000563909 SURF4O15260 269 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 PPIAL4GP0DN37 164 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 CTLA4P16410 223 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 ZNF81P51508 661 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 ERVS71-1P61550 626 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 MRPS34P82930 218 aaKnown RBP13.32□□□□□ -0.28
RNF40-205ENST00000563909 SLC34A1Q06495 639 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 HNRNPA0Q13151 305 aaKnown RBP13.32□□□□□ -0.28
RNF40-205ENST00000563909 MOGQ16653 247 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 TMEM236Q5W0B7 351 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 Q6YL49 198 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 FOXL2NBQ6ZUU3 175 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 DPPA2Q7Z7J5 298 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 SLC22A24Q8N4F4 322 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 KLHL36Q8N4N3 616 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 PACRGLQ8N7B6 248 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 FGFBP3Q8TAT2 258 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 PPP1R14AQ96A00 147 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 UPRTQ96BW1 309 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 DCLRE1CQ96SD1 692 aaKnown RBP13.32□□□□□ -0.28
RNF40-205ENST00000563909 KCNN2Q9H2S1 579 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 SIAEQ9HAT2 523 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 RNPEPL1Q9HAU8 725 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 TVP23BQ9NYZ1 205 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 OR5V1Q9UGF6 321 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 B9D1Q9UPM9 204 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 UGT2A1Q9Y4X1 527 aa13.32□□□□□ -0.28
RNF40-205ENST00000563909 A0A1W2PPL8 197 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 SPRY3O43610 288 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 PAICSP22234 425 aaKnown RBP13.31□□□□□ -0.28
RNF40-205ENST00000563909 LAP3P28838 519 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 CDAP32320 146 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 SLC25A1P53007 311 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 RIPK1Q13546 671 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 CRMP1Q14194 572 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 SNAPC1Q16533 368 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 SGCAQ16586 387 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 LRRC36Q1X8D7 754 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 FAM209AQ5JX71 171 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 SLX4IPQ5VYV7 408 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 LPCAT4Q643R3 524 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 ZBTB46Q86UZ6 589 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 GLB1L2Q8IW92 636 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 OR6V1Q8N148 313 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 PAQR4Q8N4S7 273 aaPredicted RBP13.31□□□□□ -0.28
RNF40-205ENST00000563909 SPICQ8N5J4 248 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 CYB561A3Q8NBI2 242 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 SLC30A7Q8NEW0 376 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 OR2T4Q8NH00 348 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 SGCDQ92629 289 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 PATZ1Q9HBE1 687 aaKnown RBP13.31□□□□□ -0.28
RNF40-205ENST00000563909 NOX4Q9NPH5 578 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 NECAP2Q9NVZ3 263 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 AURKAIP1Q9NWT8 199 aaPredicted RBP13.31□□□□□ -0.28
RNF40-205ENST00000563909 NKX1-2Q9UD57 310 aaPredicted RBP13.31□□□□□ -0.28
RNF40-205ENST00000563909 COA3Q9Y2R0 106 aaPredicted RBP13.31□□□□□ -0.28
RNF40-205ENST00000563909 NPTNQ9Y639 398 aa13.31□□□□□ -0.28
RNF40-205ENST00000563909 IGLV1-36A0A0B4J1U3 117 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 PRR23D1E9PI22 279 aaPredicted RBP13.3□□□□□ -0.28
RNF40-205ENST00000563909 IGHV1-46P01743 117 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 IGHV2-70P01814 119 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 PRR23D2P0DMB1 279 aaPredicted RBP13.3□□□□□ -0.28
RNF40-205ENST00000563909 CCL2P13500 99 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 MSR1P21757 451 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 PEX2P28328 305 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 EPHA2P29317 976 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 POLR2IP36954 125 aaKnown RBP13.3□□□□□ -0.28
RNF40-205ENST00000563909 CENPAP49450 140 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 RPL15P61313 204 aaKnown RBP13.3□□□□□ -0.28
RNF40-205ENST00000563909 ZIK1Q3SY52 487 aaPredicted RBP13.3□□□□□ -0.28
RNF40-205ENST00000563909 OGFRL1Q5TC84 451 aaPredicted RBP13.3□□□□□ -0.28
RNF40-205ENST00000563909 FAM27BQ5VT28 67 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 C12orf73Q69YU5 71 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 CCBE1Q6UXH8 406 aaPredicted RBP13.3□□□□□ -0.28
RNF40-205ENST00000563909 SLC16A14Q7RTX9 510 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 GALNT4Q8N4A0 578 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 TMEM86BQ8N661 226 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 CPEB3Q8NE35 698 aaKnown RBP13.3□□□□□ -0.28
RNF40-205ENST00000563909 NABP1Q96AH0 204 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 RDH12Q96NR8 316 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 TSSK2Q96PF2 358 aa13.3□□□□□ -0.28
RNF40-205ENST00000563909 WACQ9BTA9 647 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms