RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ATAD3CQ5T2N8 411 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 UBE2UQ5VVX9 321 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 TMEM268Q5VZI3 342 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 SMARCD3Q6STE5 483 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 TMEM64Q6YI46 380 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 ZNF589Q86UQ0 364 aaPredicted RBP4.15□□□□□ -1.74
SMG1-207ENST00000563235 SNX29P2Q8IUI4 249 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 SKA3Q8IX90 412 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 GPR135Q8IZ08 494 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 ZNF383Q8NA42 475 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 SPPL2BQ8TCT7 592 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 PIK3R3Q92569 461 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 STMN2Q93045 179 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 SARAFQ96BY9 339 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 S1PR3Q99500 378 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 TUBB1Q9H4B7 451 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 DDIT4Q9NX09 232 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 PACSIN3Q9UKS6 424 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 FZR1Q9UM11 496 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 HSPB11Q9Y547 144 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 A0A087WUJ7 227 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 IGSF23A1L1A6 192 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 A1L4Q6 167 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 HACD1B0YJ81 288 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 ZNF609O15014 1411 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 EDF1O60869 148 aaKnown RBP4.15□□□□□ -1.75
SMG1-207ENST00000563235 ALOX5APP20292 161 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 DYNLL1P63167 89 aaKnown RBP4.15□□□□□ -1.75
SMG1-207ENST00000563235 SLC7A9P82251 487 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 ID2Q02363 134 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 ATXN7L3Q14CW9 347 aaPredicted RBP4.15□□□□□ -1.75
SMG1-207ENST00000563235 C16orf72Q14CZ0 275 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 NEDD8Q15843 81 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 EIPR1Q53HC9 387 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 CST9Q5W186 159 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 PLET1Q6UQ28 207 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 PEG10Q86TG7 708 aaKnown RBP4.15□□□□□ -1.75
SMG1-207ENST00000563235 BEST3Q8N1M1 668 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 EMC1Q8N766 993 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 C4orf32Q8N8J7 132 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 LRTM2Q8N967 370 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 ELOA3Q8NG57 546 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 ZNF420Q8TAQ5 688 aaPredicted RBP4.15□□□□□ -1.75
SMG1-207ENST00000563235 SMAP2Q8WU79 429 aaPredicted RBP4.15□□□□□ -1.75
SMG1-207ENST00000563235 ACDQ96AP0 544 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 TXNDC15Q96J42 360 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 FAM49AQ9H0Q0 323 aaPredicted RBP4.15□□□□□ -1.75
SMG1-207ENST00000563235 ARMC7Q9H6L4 198 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 MAGIXQ9H6Y5 334 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 TAS2R13Q9NYV9 303 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 JPT1Q9UK76 154 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 AK6Q9Y3D8 172 aaKnown RBP4.15□□□□□ -1.75
SMG1-207ENST00000563235 ZNFX1Q9P2E3 1918 aaKnown RBP4.15□□□□□ -1.75
SMG1-207ENST00000563235 TP53BP1Q12888 1972 aaPredicted RBP4.15□□□□□ -1.75
SMG1-207ENST00000563235 CASP8AP2Q9UKL3 1982 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 PALLDQ8WX93 1383 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 LAMB1P07942 1786 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 SMIM28A0A1B0GU29 152 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 CLDN24A6NM45 220 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 EVPLLA8MZ36 301 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 DUSP11O75319 330 aaKnown RBP4.15□□□□□ -1.75
SMG1-207ENST00000563235 C1RP00736 705 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 IFNA1P01562 189 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 OR56A5P0C7T3 313 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 IL1RNP18510 177 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 MAKP20794 623 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 PROZP22891 400 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 RPL31P62899 125 aaKnown RBP4.15□□□□□ -1.75
SMG1-207ENST00000563235 BTN3A2P78410 334 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 GGTLC2Q14390 218 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 ABRAXAS2Q15018 415 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 CBLL1Q75N03 491 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 ZAR1Q86SH2 424 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 CPNE9Q8IYJ1 553 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 ZNF567Q8N184 647 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 OR6T1Q8NGN1 323 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 SERPINI1Q99574 410 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 SIGMAR1Q99720 223 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 ALOXE3Q9BYJ1 711 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 NXF2Q9GZY0 626 aaKnown RBP4.15□□□□□ -1.75
SMG1-207ENST00000563235 HRASLS2Q9NWW9 162 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 PURGQ9UJV8 347 aaKnown RBP4.15□□□□□ -1.75
SMG1-207ENST00000563235 MYRFQ9Y2G1 1151 aa4.15□□□□□ -1.75
SMG1-207ENST00000563235 OR5H14A6NHG9 310 aa4.14□□□□□ -1.75
SMG1-207ENST00000563235 YJEFN3A6XGL0 299 aa4.14□□□□□ -1.75
SMG1-207ENST00000563235 NEURL1BA8MQ27 555 aa4.14□□□□□ -1.75
SMG1-207ENST00000563235 TRDCB7Z8K6 153 aa4.14□□□□□ -1.75
SMG1-207ENST00000563235 F5H697 171 aa4.14□□□□□ -1.75
SMG1-207ENST00000563235 GRAP2O75791 330 aa4.14□□□□□ -1.75
SMG1-207ENST00000563235 PAK4O96013 591 aaPredicted RBP4.14□□□□□ -1.75
SMG1-207ENST00000563235 PRSS56P0CW18 603 aa4.14□□□□□ -1.75
SMG1-207ENST00000563235 ABOP16442 354 aa4.14□□□□□ -1.75
SMG1-207ENST00000563235 MEOX1P50221 254 aa4.14□□□□□ -1.75
SMG1-207ENST00000563235 STC1P52823 247 aa4.14□□□□□ -1.75
SMG1-207ENST00000563235 CTSWP56202 376 aa4.14□□□□□ -1.75
SMG1-207ENST00000563235 CLDN6P56747 220 aa4.14□□□□□ -1.75
SMG1-207ENST00000563235 WDR5P61964 334 aaKnown RBP4.14□□□□□ -1.75
SMG1-207ENST00000563235 PPP1R1AQ13522 171 aa4.14□□□□□ -1.75
SMG1-207ENST00000563235 GTF2H2Q13888 395 aa4.14□□□□□ -1.75
SMG1-207ENST00000563235 SRSF7Q16629 238 aaKnown RBP eCLIP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms