RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 APOC1P02654 83 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 ABOP16442 354 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 TPTEP56180 551 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 FOXF2Q12947 444 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 SNAI3Q3KNW1 292 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 SLC36A2Q495M3 483 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 KRTCAP3Q53RY4 240 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 RTL6Q6ICC9 239 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 DRAM2Q6UX65 266 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 COMMD2Q86X83 199 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 CISD2Q8N5K1 135 aaKnown RBP15.74■□□□□ 0.11
COMMD4-208ENST00000563220 CNEP1R1Q8N9A8 125 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 SETD6Q8TBK2 473 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 FAM71F1Q96KD3 344 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-208ENST00000563220 NOX3Q9HBY0 568 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 CYSLTR2Q9NS75 346 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 CKLFQ9UBR5 152 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 SPATA2Q9UM82 520 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 EIF2B2P49770 351 aaKnown RBP15.74■□□□□ 0.11
COMMD4-208ENST00000563220 VWA1Q6PCB0 445 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 LRRC28Q86X40 367 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-208ENST00000563220 PLPP7Q8NBV4 271 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 OR1K1Q8NGR3 316 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 ZNF671Q8TAW3 534 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 LGALS14Q8TCE9 139 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 BCL2L2Q92843 193 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-208ENST00000563220 NKX3-1Q99801 234 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-208ENST00000563220 PPP1R3EQ9H7J1 279 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 ADAM30Q9UKF2 790 aa15.74■□□□□ 0.11
COMMD4-208ENST00000563220 A0A0U1RQV5 110 aa15.73■□□□□ 0.11
COMMD4-208ENST00000563220 TPOP07202 933 aa15.73■□□□□ 0.11
COMMD4-208ENST00000563220 AZGP1P25311 298 aaKnown RBP15.73■□□□□ 0.11
COMMD4-208ENST00000563220 SPOCK1Q08629 439 aa15.73■□□□□ 0.11
COMMD4-208ENST00000563220 P2RY14Q15391 338 aa15.73■□□□□ 0.11
COMMD4-208ENST00000563220 HIKESHIQ53FT3 197 aa15.73■□□□□ 0.11
COMMD4-208ENST00000563220 XKRXQ6PP77 449 aa15.73■□□□□ 0.11
COMMD4-208ENST00000563220 DOK3Q7L591 496 aa15.73■□□□□ 0.11
COMMD4-208ENST00000563220 SERPINA12Q8IW75 414 aa15.73■□□□□ 0.11
COMMD4-208ENST00000563220 DTX3Q8N9I9 347 aa15.73■□□□□ 0.11
COMMD4-208ENST00000563220 OR14K1Q8NGZ2 314 aa15.73■□□□□ 0.11
COMMD4-208ENST00000563220 SGK3Q96BR1 496 aa15.73■□□□□ 0.11
COMMD4-208ENST00000563220 LIN7BQ9HAP6 207 aa15.73■□□□□ 0.11
COMMD4-208ENST00000563220 C14orf119Q9NWQ9 140 aa15.73■□□□□ 0.11
COMMD4-208ENST00000563220 MBD3L4A6NDZ8 208 aaPredicted RBP15.72■□□□□ 0.11
COMMD4-208ENST00000563220 MBD3L3A6NE82 208 aaPredicted RBP15.72■□□□□ 0.11
COMMD4-208ENST00000563220 MBD3L5A6NJ08 208 aaPredicted RBP15.72■□□□□ 0.11
COMMD4-208ENST00000563220 TTLL8A6PVC2 850 aa15.72■□□□□ 0.11
COMMD4-208ENST00000563220 TOXO94900 526 aa15.72■□□□□ 0.11
COMMD4-208ENST00000563220 APOA1P02647 267 aa15.72■□□□□ 0.11
COMMD4-208ENST00000563220 CD37P11049 281 aa15.72■□□□□ 0.11
COMMD4-208ENST00000563220 CD79AP11912 226 aa15.72■□□□□ 0.11
COMMD4-208ENST00000563220 DDOSTP39656 456 aa15.72■□□□□ 0.11
COMMD4-208ENST00000563220 CD300CQ08708 224 aa15.72■□□□□ 0.11
COMMD4-208ENST00000563220 BAK1Q16611 211 aa15.72■□□□□ 0.11
COMMD4-208ENST00000563220 OR2A2Q6IF42 318 aa15.72■□□□□ 0.11
COMMD4-208ENST00000563220 ANKRD16Q6P6B7 361 aa15.72■□□□□ 0.11
COMMD4-208ENST00000563220 OR4M1Q8NGD0 313 aa15.72■□□□□ 0.11
COMMD4-208ENST00000563220 MBD3L2Q8NHZ7 208 aaPredicted RBP15.72■□□□□ 0.11
COMMD4-208ENST00000563220 HPS1Q92902 700 aa15.72■□□□□ 0.11
COMMD4-208ENST00000563220 B3GNT2Q9NY97 397 aa15.72■□□□□ 0.11
COMMD4-208ENST00000563220 EXTL2Q9UBQ6 330 aa15.72■□□□□ 0.11
COMMD4-208ENST00000563220 OR5V1Q9UGF6 321 aa15.72■□□□□ 0.11
COMMD4-208ENST00000563220 FAM215AQ9Y5M1 114 aa15.72■□□□□ 0.11
COMMD4-208ENST00000563220 SVILO95425 2214 aa15.72■□□□□ 0.11
COMMD4-208ENST00000563220 TMEM127O75204 238 aa15.71■□□□□ 0.11
COMMD4-208ENST00000563220 IGHV1-2P23083 117 aa15.71■□□□□ 0.11
COMMD4-208ENST00000563220 GNALP38405 381 aa15.71■□□□□ 0.11
COMMD4-208ENST00000563220 TDGF1P3P51864 188 aa15.71■□□□□ 0.11
COMMD4-208ENST00000563220 RAB1AP62820 205 aa15.71■□□□□ 0.11
COMMD4-208ENST00000563220 METAP1DQ6UB28 335 aaPredicted RBP15.71■□□□□ 0.11
COMMD4-208ENST00000563220 GDPD3Q7L5L3 318 aa15.71■□□□□ 0.11
COMMD4-208ENST00000563220 CD163Q86VB7 1156 aa15.71■□□□□ 0.11
COMMD4-208ENST00000563220 RPRMLQ8N4K4 120 aa15.71■□□□□ 0.11
COMMD4-208ENST00000563220 OR10A2Q9H208 303 aa15.71■□□□□ 0.11
COMMD4-208ENST00000563220 LOC100509620A0A075B734 347 aa15.71■□□□□ 0.11
COMMD4-208ENST00000563220 LCATP04180 440 aa15.71■□□□□ 0.11
COMMD4-208ENST00000563220 GABRA1P14867 456 aa15.71■□□□□ 0.11
COMMD4-208ENST00000563220 CFPP27918 469 aa15.71■□□□□ 0.11
COMMD4-208ENST00000563220 FAM166AQ6J272 317 aa15.71■□□□□ 0.11
COMMD4-208ENST00000563220 ZNF529Q6P280 563 aa15.71■□□□□ 0.11
COMMD4-208ENST00000563220 LYPD6Q86Y78 171 aa15.71■□□□□ 0.11
COMMD4-208ENST00000563220 OR52H1Q8NGJ2 320 aa15.71■□□□□ 0.11
COMMD4-208ENST00000563220 OR6K3Q8NGY3 331 aa15.71■□□□□ 0.11
COMMD4-208ENST00000563220 STEAP1Q9UHE8 339 aa15.71■□□□□ 0.11
COMMD4-208ENST00000563220 NCOR2Q9Y618 2525 aa15.7■□□□□ 0.1
COMMD4-208ENST00000563220 MEGF11A6BM72 1044 aa15.7■□□□□ 0.1
COMMD4-208ENST00000563220 WDR1O75083 606 aa15.7■□□□□ 0.1
COMMD4-208ENST00000563220 TNFSF13O75888 250 aa15.7■□□□□ 0.1
COMMD4-208ENST00000563220 CALCBP10092 127 aa15.7■□□□□ 0.1
COMMD4-208ENST00000563220 SPNP16150 400 aa15.7■□□□□ 0.1
COMMD4-208ENST00000563220 ZNF20P17024 532 aa15.7■□□□□ 0.1
COMMD4-208ENST00000563220 IL18Q14116 193 aa15.7■□□□□ 0.1
COMMD4-208ENST00000563220 SF3B4Q15427 424 aaKnown RBP eCLIP15.7■□□□□ 0.13e-6■■■■■ 28.5
COMMD4-208ENST00000563220 PYDC2Q56P42 97 aa15.7■□□□□ 0.1
COMMD4-208ENST00000563220 GLT8D1Q68CQ7 371 aa15.7■□□□□ 0.1
COMMD4-208ENST00000563220 Q6ZSR3 168 aa15.7■□□□□ 0.1
COMMD4-208ENST00000563220 Q6ZT83 130 aa15.7■□□□□ 0.1
COMMD4-208ENST00000563220 OR8H2Q8N162 312 aa15.7■□□□□ 0.1
COMMD4-208ENST00000563220 OR5D14Q8NGL3 314 aa15.7■□□□□ 0.1
COMMD4-208ENST00000563220 OR2AE1Q8NHA4 323 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms