RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 HYOU1Q9Y4L1 999 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 LRP4O75096 1905 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 ASTN1O14525 1302 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 MTCL1Q9Y4B5 1905 aaKnown RBP2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 OR6C74A6NCV1 312 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 TVP23AA6NH52 213 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 NDUFC2-KCTD14E9PQ53 114 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 K7EN84 100 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 SNAI1O95863 264 aaPredicted RBP2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 NPPAP01160 153 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 GCGP01275 180 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 HLA-DPB1P04440 258 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 DCNP07585 359 aaKnown RBP2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 TLX1NBP0CAT3 122 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 RAB3AP20336 220 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 RAB5AP20339 215 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 HTR2CP28335 458 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 RBM34P42696 430 aaKnown RBP2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 KIR3DL2P43630 455 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 PPICP45877 212 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 ZNF133P52736 654 aaPredicted RBP2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 AP1S2P56377 157 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 CLDN6P56747 220 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 ZNF121P58317 390 aaPredicted RBP2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 IFFO1Q0D2I5 559 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 PON2Q15165 354 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 QPRTQ15274 297 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 C5orf64Q2M2E5 130 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 RWDD4Q6NW29 188 aaKnown RBP2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 CD300LGQ6UXG3 332 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 SLC35D2Q76EJ3 337 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 OR2W3Q7Z3T1 314 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 SLC30A8Q8IWU4 369 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 C11orf72Q8NBR9 251 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 MDS2Q8NDY4 140 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 NOXO1Q8NFA2 376 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 NDNFQ8TB73 568 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 SUN5Q8TC36 379 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 RXFP2Q8WXD0 754 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 RGP1Q92546 391 aaPredicted RBP2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 TIMM17AQ99595 171 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 GABRG3Q99928 467 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 ARMC7Q9H6L4 198 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 KIR3DX1Q9H7L2 352 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 NOX3Q9HBY0 568 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 CD209Q9NNX6 404 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 FAM49BQ9NUQ9 324 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 TMEM100Q9NV29 134 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 CTSFQ9UBX1 484 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 ZNF222Q9UK12 451 aa2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 MN1Q10571 1320 aaPredicted RBP2.13□□□□□ -2.07
SHCBP1-202ENST00000563219 IGLV11-55A0A075B6I3 123 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 IGHV3-74A0A0B4J1X5 117 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 IGKV1-8A0A0C4DH67 115 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 IGHV3-64DA0A0J9YX35 117 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 A0A1B0GW15 77 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 A0A1W2PRF3 423 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 A0A1W2PRM7 423 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 DFFAO00273 331 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 ERI3O43414 337 aaKnown RBP2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 ANGPTL7O43827 346 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 SC5DO75845 299 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 RHOXF2BP0C7M4 288 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 ZNF806P0C7X5 589 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 MDKP21741 143 aaPredicted RBP2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 CCNOP22674 350 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 SSTR5P35346 364 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 GPR4P46093 362 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 RPS9P46781 194 aaKnown RBP2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 UBE2E1P51965 193 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 UBE2KP61086 200 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 ATP6V1FQ16864 119 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 ORMDL2Q53FV1 153 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 LIN9Q5TKA1 542 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 FBXW9Q5XUX1 488 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 DUPD1Q68J44 220 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 PRMT9Q6P2P2 845 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 ZNF530Q6P9A1 599 aaPredicted RBP2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 WDR82Q6UXN9 313 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 FAM92BQ6ZTR7 304 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 RNF175Q8N4F7 328 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 ZNF645Q8N7E2 425 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 DRAXINQ8NBI3 349 aaPredicted RBP2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 OR10W1Q8NGF6 305 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 PIFOQ8TCI5 191 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 BLOC1S5Q8TDH9 187 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 ING5Q8WYH8 240 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 TMEM159Q96B96 161 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 MSANTD3Q96H12 275 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 CENPNQ96H22 339 aaPredicted RBP2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 UBE2E2Q96LR5 201 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 NAPGQ99747 312 aaPredicted RBP2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 RHOXF2Q9BQY4 288 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 CHAC1Q9BUX1 264 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 MAP1LC3CQ9BXW4 147 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 REEP1Q9H902 201 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 TMEM27Q9HBJ8 222 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 SLC38A10Q9HBR0 1119 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 ISYNA1Q9NPH2 558 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 UBAP1Q9NZ09 502 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms