RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 DGCR6Q14129 220 aa1.33□□□□□ -2.2
CHD9-207ENST00000562806 MED27Q6P2C8 311 aa1.33□□□□□ -2.2
CHD9-207ENST00000562806 SPESP1Q6UW49 350 aa1.33□□□□□ -2.2
CHD9-207ENST00000562806 CD300LGQ6UXG3 332 aa1.33□□□□□ -2.2
CHD9-207ENST00000562806 RTL4Q6ZR62 310 aa1.33□□□□□ -2.2
CHD9-207ENST00000562806 CENPQQ7L2Z9 268 aaPredicted RBP1.33□□□□□ -2.2
CHD9-207ENST00000562806 CMTM1Q8IZ96 169 aa1.33□□□□□ -2.2
CHD9-207ENST00000562806 ZNF101Q8IZC7 436 aa1.33□□□□□ -2.2
CHD9-207ENST00000562806 ZFP41Q8N8Y5 198 aa1.33□□□□□ -2.2
CHD9-207ENST00000562806 SNX31Q8N9S9 440 aa1.33□□□□□ -2.2
CHD9-207ENST00000562806 OR5K2Q8NHB8 316 aa1.33□□□□□ -2.2
CHD9-207ENST00000562806 LYPD6BQ8NI32 183 aa1.33□□□□□ -2.2
CHD9-207ENST00000562806 OR51E1Q8TCB6 317 aa1.33□□□□□ -2.2
CHD9-207ENST00000562806 PHOSPHO2Q8TCD6 241 aa1.33□□□□□ -2.2
CHD9-207ENST00000562806 ZCCHC13Q8WW36 166 aaKnown RBP1.33□□□□□ -2.2
CHD9-207ENST00000562806 ZNF606Q8WXB4 792 aa1.33□□□□□ -2.2
CHD9-207ENST00000562806 ECHDC3Q96DC8 303 aa1.33□□□□□ -2.2
CHD9-207ENST00000562806 WDR34Q96EX3 536 aa1.33□□□□□ -2.2
CHD9-207ENST00000562806 NRBF2Q96F24 287 aa1.33□□□□□ -2.2
CHD9-207ENST00000562806 TGS1Q96RS0 853 aaKnown RBP1.33□□□□□ -2.2
CHD9-207ENST00000562806 ZYG11BQ9C0D3 744 aa1.33□□□□□ -2.2
CHD9-207ENST00000562806 MRM3Q9HC36 420 aaKnown RBP1.33□□□□□ -2.2
CHD9-207ENST00000562806 TAS2R1Q9NYW7 299 aa1.33□□□□□ -2.2
CHD9-207ENST00000562806 ZNF230Q9UIE0 474 aaPredicted RBP1.33□□□□□ -2.2
CHD9-207ENST00000562806 HES2Q9Y543 173 aa1.33□□□□□ -2.2
CHD9-207ENST00000562806 COL5A1P20908 1838 aaPredicted RBP1.33□□□□□ -2.2
CHD9-207ENST00000562806 IGKV1-8A0A0C4DH67 115 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 KRTAP5-8O75690 187 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 FLOT1O75955 427 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 LGALS3P17931 250 aaKnown RBP1.32□□□□□ -2.2
CHD9-207ENST00000562806 PFN2P35080 140 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 CCNG1P51959 295 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 RGS8P57771 180 aaPredicted RBP1.32□□□□□ -2.2
CHD9-207ENST00000562806 KRTAP12-4P60329 112 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 LIPEQ05469 1076 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 NAB1Q13506 487 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 NCF4Q15080 339 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 SLC25A35Q3KQZ1 300 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 BPIFCQ8NFQ6 507 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 SLC26A10Q8NG04 563 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 OR1L1Q8NH94 360 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 AKR7LQ8NHP1 331 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 NUBPLQ8TB37 319 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 ENKURQ8TC29 256 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 CAPSLQ8WWF8 208 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 XPO6Q96QU8 1125 aaKnown RBP1.32□□□□□ -2.2
CHD9-207ENST00000562806 GPR21Q99679 349 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 C20orf24Q9BUV8 137 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 NUP58Q9BVL2 599 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 ANGPTL4Q9BY76 406 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 SLC39A1Q9NY26 324 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 HMGXB4Q9UGU5 601 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 PITPNC1Q9UKF7 332 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 SIGLEC7Q9Y286 467 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 SLC17A4Q9Y2C5 497 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 YARS2Q9Y2Z4 477 aaKnown RBP1.32□□□□□ -2.2
CHD9-207ENST00000562806 TRIOBPQ9H2D6 2365 aa1.32□□□□□ -2.2
CHD9-207ENST00000562806 XKRY2A2RUG3 117 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 NCBP2LA6PVI3 153 aaKnown RBP1.31□□□□□ -2.2
CHD9-207ENST00000562806 CEACAM18A8MTB9 384 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 A8MWL6 223 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 PLPP1O14494 284 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 RNF13O43567 381 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 HBE1P02100 147 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 RPN2P04844 631 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 UQCRFS1P1P0C7P4 283 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 NTF3P20783 257 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 HLA-DMAP28067 261 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 PBLDP30039 288 aaPredicted RBP1.31□□□□□ -2.2
CHD9-207ENST00000562806 MPIP34949 423 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 SYKP43405 635 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 TAS2R46P59540 309 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 CYP24A1Q07973 514 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 DMC1Q14565 340 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 RBMY1FQ15415 496 aaKnown RBP1.31□□□□□ -2.2
CHD9-207ENST00000562806 HSDL1Q3SXM5 330 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 HSP90AB3PQ58FF7 597 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 MFSD14CQ5VZR4 134 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 APOBEC3HQ6NTF7 200 aaKnown RBP1.31□□□□□ -2.2
CHD9-207ENST00000562806 SLC22A9Q8IVM8 553 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 SGPP2Q8IWX5 399 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 TTC29Q8NA56 475 aaPredicted RBP1.31□□□□□ -2.2
CHD9-207ENST00000562806 CMTM2Q8TAZ6 248 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 RERGQ96A58 199 aaPredicted RBP1.31□□□□□ -2.2
CHD9-207ENST00000562806 ZBED3Q96IU2 234 aaPredicted RBP1.31□□□□□ -2.2
CHD9-207ENST00000562806 GSDMAQ96QA5 445 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 TEAD3Q99594 435 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 KCNS3Q9BQ31 491 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 SHANK2-AS3Q9BTD1 123 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 TMEM243Q9BU79 118 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 EMC6Q9BV81 110 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 CALN1Q9BXU9 219 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 SLIRPQ9GZT3 109 aaKnown RBP1.31□□□□□ -2.2
CHD9-207ENST00000562806 PIGUQ9H490 435 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 LYARQ9NX58 379 aaKnown RBP1.31□□□□□ -2.2
CHD9-207ENST00000562806 SLC17A7Q9P2U7 560 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 MMACHCQ9Y4U1 282 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 DENND4AQ7Z401 1863 aa1.31□□□□□ -2.2
CHD9-207ENST00000562806 LTBP4Q8N2S1 1624 aa1.3□□□□□ -2.2
CHD9-207ENST00000562806 SMIM26A0A096LP01 95 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms