RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	PRDX6	P30041	224 aa		11.33	□□□□□ -0.6
RNF31-223	ENST00000560754	PRSS12	P56730	875 aa		11.33	□□□□□ -0.6
RNF31-223	ENST00000560754	C11orf91	Q3C1V1	193 aa		11.33	□□□□□ -0.6
RNF31-223	ENST00000560754	TMEM86B	Q8N661	226 aa		11.33	□□□□□ -0.6
RNF31-223	ENST00000560754	FAM71F1	Q96KD3	344 aa	Predicted RBP	11.33	□□□□□ -0.6
RNF31-223	ENST00000560754	IFT27	Q9BW83	186 aa		11.33	□□□□□ -0.6
RNF31-223	ENST00000560754	SPAG4	Q9NPE6	437 aa		11.33	□□□□□ -0.6
RNF31-223	ENST00000560754	ERVK-18	Q9QC07	812 aa		11.33	□□□□□ -0.6
RNF31-223	ENST00000560754	TMCC3	Q9ULS5	477 aa		11.33	□□□□□ -0.6
RNF31-223	ENST00000560754	NOP16	Q9Y3C1	178 aa	Known RBP	11.33	□□□□□ -0.6
RNF31-223	ENST00000560754	CENPVL3	A0A0U1RRI6	287 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	LGALS8	O00214	317 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	P2RY10	O00398	339 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	ENSA	O43768	121 aa	Known RBP	11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	GMNN	O75496	209 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	HSD17B1	P14061	328 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	OMG	P23515	440 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	NOS3	P29474	1203 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	ZNF92	Q03936	586 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	TSPAN31	Q12999	210 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	OR8G1	Q15617	311 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	KCNJ8	Q15842	424 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	PCK2	Q16822	640 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	GPR157	Q5UAW9	335 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	PRAMEF6	Q5VXH4	476 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	SPATC1	Q76KD6	591 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	SPERT	Q8NA61	448 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	C19orf18	Q8NEA5	215 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	FANK1	Q8TC84	345 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	SPRYD4	Q8WW59	207 aa	Predicted RBP	11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	ZNRF4	Q8WWF5	429 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	ZDHHC16	Q969W1	377 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	FN3KRP	Q9HA64	309 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	IL1RAP	Q9NPH3	570 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	UFSP2	Q9NUQ7	469 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	IL20	Q9NYY1	176 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	MRPL15	Q9P015	296 aa	Known RBP	11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	CTSZ	Q9UBR2	303 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754	CD300A	Q9UGN4	299 aa		11.32	□□□□□ -0.6
RNF31-223	ENST00000560754		M0R135	149 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	OR10H3	O60404	316 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	FCN3	O75636	299 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	NDUFA7	O95182	113 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	HLA-DQA2	P01906	255 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	ZNF823	P16415	610 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	ANOS1	P23352	680 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	CFHR2	P36980	270 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	IFNGR2	P38484	337 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	HOXA4	Q00056	320 aa	Predicted RBP	11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	RELB	Q01201	579 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	DEFA6	Q01524	100 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	SNAI3	Q3KNW1	292 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	PDLIM3	Q53GG5	364 aa	Predicted RBP	11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	SLC35F1	Q5T1Q4	408 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	SFRP4	Q6FHJ7	346 aa	Predicted RBP	11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	DRAM2	Q6UX65	266 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	RNF148	Q8N7C7	305 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	GNPDA2	Q8TDQ7	276 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	SPTSSA	Q969W0	71 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	ZNF799	Q96GE5	643 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	TBX15	Q96SF7	602 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	FN3K	Q9H479	309 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	BEX1	Q9HBH7	125 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	TRIM36	Q9NQ86	728 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	ADA2	Q9NZK5	511 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	C1RL	Q9NZP8	487 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	KAAG1	Q9UBP8	84 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	POMT1	Q9Y6A1	747 aa		11.31	□□□□□ -0.6
RNF31-223	ENST00000560754	TRAV38-1	A0A0B4J264	116 aa		11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	C5orf63	A6NC05	138 aa		11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	BHLHE40	O14503	412 aa		11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	KRT36	O76013	467 aa		11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	TOX4	O94842	621 aa		11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	SFTPB	P07988	381 aa		11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	MELTF	P08582	738 aa		11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	RPL15	P61313	204 aa	Known RBP	11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	TEX30	Q5JUR7	227 aa		11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	PGBD2	Q6P3X8	592 aa		11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	FIP1L1	Q6UN15	594 aa	Known RBP	11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	ZNF620	Q6ZNG0	422 aa		11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	MRPL21	Q7Z2W9	205 aa	Known RBP	11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	C11orf53	Q8IXP5	236 aa		11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	GCSAM	Q8N6F7	178 aa		11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	KIR3DL3	Q8N743	410 aa		11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	PNLDC1	Q8NA58	520 aa	Known RBP	11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	SDR9C7	Q8NEX9	313 aa		11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	OR4F5	Q8NH21	305 aa		11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	WFDC12	Q8WWY7	111 aa		11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	WDFY2	Q96P53	400 aa		11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	PCGF1	Q9BSM1	259 aa		11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	CHIA	Q9BZP6	476 aa		11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	SIRPD	Q9H106	197 aa		11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	RASSF4	Q9H2L5	321 aa		11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	PDP1	Q9P0J1	537 aa	Predicted RBP	11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	MAGEL2	Q9UJ55	1249 aa		11.3	□□□□□ -0.6
RNF31-223	ENST00000560754	CLPSL1	A2RUU4	121 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	OOEP	A6NGQ2	149 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	ECD	O95905	644 aa	Predicted RBP	11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	KNG1	P01042	644 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms