RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 CR1LQ2VPA4 569 aa10.98□□□□□ -0.65
CTDSPL2-209ENST00000560620 GFOD2Q3B7J2 385 aa10.98□□□□□ -0.65
CTDSPL2-209ENST00000560620 KRTAP21-3Q3LHN1 58 aa10.98□□□□□ -0.65
CTDSPL2-209ENST00000560620 FAM120AOSQ5T036 256 aa10.98□□□□□ -0.65
CTDSPL2-209ENST00000560620 PRIMA1Q86XR5 153 aa10.98□□□□□ -0.65
CTDSPL2-209ENST00000560620 PARP8Q8N3A8 854 aa10.98□□□□□ -0.65
CTDSPL2-209ENST00000560620 PYDC1Q8WXC3 89 aa10.98□□□□□ -0.65
CTDSPL2-209ENST00000560620 TOR3AQ9H497 397 aa10.98□□□□□ -0.65
CTDSPL2-209ENST00000560620 TMEM106BQ9NUM4 274 aa10.98□□□□□ -0.65
CTDSPL2-209ENST00000560620 TMEM160Q9NX00 188 aa10.98□□□□□ -0.65
CTDSPL2-209ENST00000560620 H2AFY2Q9P0M6 372 aaPredicted RBP10.98□□□□□ -0.65
CTDSPL2-209ENST00000560620 ENOPH1Q9UHY7 261 aa10.98□□□□□ -0.65
CTDSPL2-209ENST00000560620 DYSFO75923 2080 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 MALRD1Q5VYJ5 2156 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 SAC3D1A6NKF1 404 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 FAM157AC9JC47 383 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 F5H5P2 479 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 APOC1P02654 83 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 MSMBP08118 114 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 MRPL3P09001 348 aaKnown RBP10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 FAM157CP0CG43 387 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 SRD5A1P18405 259 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 PCMT1P22061 227 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 OTX1P32242 354 aaPredicted RBP10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 RBMXP38159 391 aaKnown RBP10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 ZNF92Q03936 586 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 KPNB1Q14974 876 aaKnown RBP10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 OR8G1Q15617 311 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 SLC35D3Q5M8T2 416 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 GLYATL3Q5SZD4 288 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 LCN1P1Q5VSP4 162 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 FAM57BQ71RH2 274 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 TIGD4Q8IY51 512 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 OR51F2Q8NH61 342 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 OTOSQ8NHW6 89 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 RNF133Q8WVZ7 376 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 DUS3LQ96G46 650 aaKnown RBP10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 CENPNQ96H22 339 aaPredicted RBP10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 MEGF10Q96KG7 1140 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 SLC30A2Q9BRI3 323 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 SP140LQ9H930 580 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 MARCH7Q9H992 704 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 HIF1ANQ9NWT6 349 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 DCAF16Q9NXF7 216 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 TMEFF2Q9UIK5 374 aaPredicted RBP10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 LAMP5Q9UJQ1 280 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 OAZ3Q9UMX2 235 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 NOP16Q9Y3C1 178 aaKnown RBP10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 NPTNQ9Y639 398 aa10.97□□□□□ -0.65
CTDSPL2-209ENST00000560620 TANC2Q9HCD6 1990 aa10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 CD300LBA8K4G0 201 aa10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 M0R129 80 aa10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 MLNRO43193 412 aa10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 XRCC2O43543 280 aa10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 IRF2P14316 349 aa10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 CA6P23280 308 aa10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 SRP14P37108 136 aaKnown RBP10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 DVL1P1P54792 670 aaPredicted RBP10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 LMO4P61968 165 aa10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 KDM4DQ6B0I6 523 aa10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 FAHD2BQ6P2I3 314 aaPredicted RBP10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 KRT77Q7Z794 578 aa10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 KLHL36Q8N4N3 616 aa10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 TCEANCQ8N8B7 351 aa10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 ZNF454Q8N9F8 522 aa10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 ZNF420Q8TAQ5 688 aaPredicted RBP10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 TMEM186Q96B77 213 aa10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 FAHD2AQ96GK7 314 aa10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 PGAM5Q96HS1 289 aa10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 AMELYQ99218 206 aa10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 CIB1Q99828 191 aa10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 ADAT1Q9BUB4 502 aaKnown RBP10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 RIBC2Q9H4K1 309 aa10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 OPA3Q9H6K4 179 aa10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 GCM1Q9NP62 436 aa10.96□□□□□ -0.65
CTDSPL2-209ENST00000560620 ABCA2Q9BZC7 2435 aa10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 C5orf63A6NC05 138 aa10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 LRRC30A6NM36 301 aa10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 KIAA1324LA8MWY0 1029 aaPredicted RBP10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 PRKYO43930 277 aa10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 IGHV2-5P01817 119 aa10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 EPHA2P29317 976 aa10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 OPRL1P41146 370 aa10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 MMP16P51512 607 aa10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 HCCSP53701 268 aa10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 ZNF121P58317 390 aaPredicted RBP10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 ACTR3P61158 418 aa10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 BTG1P62324 171 aa10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 KCTD18Q6PI47 426 aaPredicted RBP10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 LRRN1Q6UXK5 716 aa10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 SLC16A9Q7RTY1 509 aa10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 MOGAT3Q86VF5 341 aa10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 OR52H1Q8NGJ2 320 aa10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 REEP6Q96HR9 211 aa10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 IL4I1Q96RQ9 567 aa10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 TEAD3Q99594 435 aa10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 REPIN1Q9BWE0 567 aaKnown RBP10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 SLC22A4Q9H015 551 aa10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 GABARAPL1Q9H0R8 117 aa10.95□□□□□ -0.66
CTDSPL2-209ENST00000560620 OR10A2Q9H208 303 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms