RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 TREM2Q9NZC2 230 aa12.81□□□□□ -0.36
SNRPA1-210ENST00000560383 TANC2Q9HCD6 1990 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 A0A0A6YYJ9 748 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 C5orf63A6NC05 138 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 FAM157AC9JC47 383 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 MLNRO43193 412 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 OPRL1P41146 370 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 SLC6A9P48067 706 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 PRKXP51817 358 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 EFNB1P98172 346 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 EIF2B1Q14232 305 aaKnown RBP12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 CCDC121Q6ZUS5 278 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 PRSS45Q7RTY3 260 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 ZNF454Q8N9F8 522 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 OR6N2Q8NGY6 317 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 OTOSQ8NHW6 89 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 ITLN1Q8WWA0 313 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 LRTOMTQ8WZ04 291 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 SPSB4Q96A44 273 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 OTULINQ96BN8 352 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 ZMYND19Q96E35 227 aaPredicted RBP12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 PLEKHA8Q96JA3 519 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 SIGLEC11Q96RL6 698 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 AMELYQ99218 206 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 GCM1Q9NP62 436 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 TMEM106BQ9NUM4 274 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 HIF1ANQ9NWT6 349 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 DCAF16Q9NXF7 216 aa12.8□□□□□ -0.36
SNRPA1-210ENST00000560383 TRAV20A0A0B4J274 112 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 CD300LBA8K4G0 201 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 IFNL4K9M1U5 179 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 IGHV2-70P01814 119 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 IGHV2-5P01817 119 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 APOC1P02654 83 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 ANPEPP15144 967 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 GATA4P43694 442 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 ACTR3P61158 418 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 ZNF92Q03936 586 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 TAF13Q15543 124 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 SNAPC1Q16533 368 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 ZNF181Q2M3W8 571 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 KLHL12Q53G59 568 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 GLYATL3Q5SZD4 288 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 MRPL21Q7Z2W9 205 aaKnown RBP12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 AMIGO2Q86SJ2 522 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 PEG10Q86TG7 708 aaKnown RBP12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 TEX29Q8N6K0 151 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 CELF2-AS1Q8N7Q2 184 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 BHLHE23Q8NDY6 225 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 BBS1Q8NFJ9 593 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 OR10AD1Q8NGE0 317 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 RAB39BQ96DA2 213 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 CENPNQ96H22 339 aaPredicted RBP12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 MEGF10Q96KG7 1140 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 OPA3Q9H6K4 179 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 ZNF665Q9H7R5 613 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 KRT84Q9NSB2 600 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 TMEM100Q9NV29 134 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 TVP23BQ9NYZ1 205 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 PPP1R3CQ9UQK1 317 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 NPTNQ9Y639 398 aa12.79□□□□□ -0.36
SNRPA1-210ENST00000560383 ZAR1LA6NP61 321 aa12.78□□□□□ -0.36
SNRPA1-210ENST00000560383 H0YL77 283 aa12.78□□□□□ -0.36
SNRPA1-210ENST00000560383 MITFO75030 526 aaPredicted RBP12.78□□□□□ -0.36
SNRPA1-210ENST00000560383 FSTL3O95633 263 aa12.78□□□□□ -0.36
SNRPA1-210ENST00000560383 EPHA2P29317 976 aa12.78□□□□□ -0.36
SNRPA1-210ENST00000560383 SRP9P49458 86 aaKnown RBP12.78□□□□□ -0.36
SNRPA1-210ENST00000560383 PRSS12P56730 875 aa12.78□□□□□ -0.36
SNRPA1-210ENST00000560383 SRSF2Q01130 221 aaKnown RBP12.78□□□□□ -0.36
SNRPA1-210ENST00000560383 SLX4IPQ5VYV7 408 aa12.78□□□□□ -0.36
SNRPA1-210ENST00000560383 OR2AE1Q8NHA4 323 aa12.78□□□□□ -0.36
SNRPA1-210ENST00000560383 ZFAND2BQ8WV99 257 aa12.78□□□□□ -0.36
SNRPA1-210ENST00000560383 TEAD3Q99594 435 aa12.78□□□□□ -0.36
SNRPA1-210ENST00000560383 PRRG3Q9BZD7 231 aa12.78□□□□□ -0.36
SNRPA1-210ENST00000560383 SLC22A4Q9H015 551 aa12.78□□□□□ -0.36
SNRPA1-210ENST00000560383 SP140LQ9H930 580 aa12.78□□□□□ -0.36
SNRPA1-210ENST00000560383 ENOPH1Q9UHY7 261 aa12.78□□□□□ -0.36
SNRPA1-210ENST00000560383 NOP16Q9Y3C1 178 aaKnown RBP12.78□□□□□ -0.36
SNRPA1-210ENST00000560383 CCDC182A6NF36 153 aa12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 F5H5P2 479 aa12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 TMEM178BH3BS89 294 aa12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 XRCC2O43543 280 aa12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 PRKYO43930 277 aa12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 SELENOFO60613 162 aa12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 PTBP3O95758 552 aaKnown RBP12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 PNPP00491 289 aa12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 LYNP07948 512 aa12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 SLC2A1P11166 492 aa12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 ALOX5APP20292 161 aa12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 DDOSTP39656 456 aa12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 CD200P41217 278 aa12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 CX3CR1P49238 355 aa12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 MMP16P51512 607 aa12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 HNRNPA0Q13151 305 aaKnown RBP12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 MAB21L1Q13394 359 aa12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 APOFQ13790 326 aa12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 TMEM155Q4W5P6 130 aa12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 LCE2DQ5TA82 110 aaPredicted RBP12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 C12orf73Q69YU5 71 aa12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 SPATC1Q76KD6 591 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms