RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 KPTNQ9Y664 436 aa10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 H7C1C5 153 aa10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 CXCR6O00574 342 aa10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 NPFFO15130 113 aa10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 DCTN3O75935 186 aa10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 VSIG10L2P0DP72 767 aa10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 RBM34P42696 430 aaKnown RBP10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 OR1E2P47887 323 aa10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 RGS6P49758 472 aa10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 DLX1P56177 255 aa10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 PRSS12P56730 875 aa10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 LCN6P62502 163 aa10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 EMX1Q04741 257 aaPredicted RBP10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 KRT72Q14CN4 511 aa10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 CCDC92Q53HC0 331 aaPredicted RBP10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 OTPQ5XKR4 325 aa10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 METAP1DQ6UB28 335 aaPredicted RBP10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 FGFRL1Q8N441 504 aa10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 BOLLQ8N9W6 283 aaKnown RBP10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 LRRC75AQ8NAA5 344 aa10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 APOBEC3DQ96AK3 386 aaPredicted RBP10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 R3HDM4Q96D70 268 aa10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 WDR76Q9H967 626 aa10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 RNF7Q9UBF6 113 aa10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 CD300AQ9UGN4 299 aa10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 RPUSD1Q9UJJ7 312 aaKnown RBP10.48□□□□□ -0.73
RABGGTA-213ENST00000560127 A0A1W2PRD5 423 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 A0A1W2PRF3 423 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 A0A1W2PRM7 423 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 ADARB2-AS1A8MUL3 147 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 DVL1O14640 695 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 FFAR1O14842 300 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 PPP1R3DO95685 299 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 ECDO95905 644 aaPredicted RBP10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 GYPAP02724 150 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 CD28P10747 220 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 IGLL1P15814 213 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 CTXN1P60606 82 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 AQP6Q13520 282 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 OR8B8Q15620 311 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 C11orf91Q3C1V1 193 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 PGAM4Q8N0Y7 254 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 PNKDQ8N490 385 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 CCDC197Q8NCU1 140 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 LY6G5BQ8NDX9 201 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 OR4C13Q8NGP0 309 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 OR2T6Q8NHC8 308 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 TMEM239Q8WW34 195 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 SPAG4Q9NPE6 437 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 SIRT7Q9NRC8 400 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 SH3GLB1Q9Y371 365 aa10.47□□□□□ -0.73
RABGGTA-213ENST00000560127 TRAV38-1A0A0B4J264 116 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 WI2-2373I1.2A0A1W2PRP0 233 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 MEGF11A6BM72 1044 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 OOEPA6NGQ2 149 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 A6NIZ1 184 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 H3BUX3 64 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 NDUFA2O43678 99 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 FBXO24O75426 580 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 PAHP00439 452 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 EEF1B2P24534 225 aaKnown RBP10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 MSX2P35548 267 aaPredicted RBP10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 RAP1BP61224 184 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 RAP1AP62834 184 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 KLRD1Q13241 179 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 PIN1Q13526 163 aaPredicted RBP10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 DEFB121Q5J5C9 76 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 ZBTB37Q5TC79 503 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 CBLL1Q75N03 491 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 FAM90A1Q86YD7 464 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 OR4F17Q8NGA8 305 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 ST8SIA4Q92187 359 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 HSH2DQ96JZ2 352 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 OR4F4Q96R69 305 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 KCTD14Q9BQ13 255 aaPredicted RBP10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 ONECUT1Q9UBC0 465 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 DNAJB11Q9UBS4 358 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 A4GNTQ9UNA3 340 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 AP3M1Q9Y2T2 418 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 MAB21L2Q9Y586 359 aa10.46□□□□□ -0.73
RABGGTA-213ENST00000560127 HUWE1Q7Z6Z7 4374 aaKnown RBP10.46□□□□□ -0.74
RABGGTA-213ENST00000560127 A0A1B0GW55 424 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 MEIOCA2RUB1 952 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 J3KTA2 159 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 RER1O15258 196 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 SERPINA1P01009 418 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 SEMG1P04279 462 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 DUX4L2P0CJ85 424 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 DUX4L3P0CJ86 424 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 DUX4L4P0CJ87 422 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 DUX4L5P0CJ88 424 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 DUX4L6P0CJ89 424 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 DUX4L7P0CJ90 424 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 HSD17B1P14061 328 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 SAA4P35542 130 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 TAS2R41P59536 307 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 SELENOWP63302 87 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 GUCA2AQ02747 115 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 COL10A1Q03692 680 aa10.45□□□□□ -0.74
RABGGTA-213ENST00000560127 POU4F2Q12837 409 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms