RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 SHISA9B4DS77 424 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 SMPD2O60906 423 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 PLAUP00749 431 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 ISG15P05161 165 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 CELP19835 753 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 CCL1P22362 96 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 CCNOP22674 350 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 NR4A1P22736 598 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 PTAFRP25105 342 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 HSD11B1P28845 292 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 CRYBB2P43320 205 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 RPL5P46777 297 aaKnown RBP8.07□□□□□ -1.12
HERC1-206ENST00000559996 RGS6P49758 472 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 NR1H2P55055 460 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 ZNF92Q03936 586 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 BSPH1Q075Z2 132 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 MRPL28Q13084 256 aaKnown RBP8.07□□□□□ -1.12
HERC1-206ENST00000559996 BLMHQ13867 455 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 INSL4Q14641 139 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 DAZAP2Q15038 168 aaPredicted RBP8.07□□□□□ -1.12
HERC1-206ENST00000559996 TAF13Q15543 124 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 TSTQ16762 297 aaKnown RBP8.07□□□□□ -1.12
HERC1-206ENST00000559996 TBC1D28Q2M2D7 210 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 GLYATL3Q5SZD4 288 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 LIPKQ5VXJ0 399 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 TMEM91Q6ZNR0 172 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 RFPL4BQ6ZWI9 263 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 FAM57BQ71RH2 274 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 KRT74Q7RTS7 529 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 SSX8Q7RTT4 187 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 OR51A4Q8NGJ6 313 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 FCGR1BQ92637 280 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 GHSRQ92847 366 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 SPTSSAQ969W0 71 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 SMIM19Q96E16 107 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 TRMT61AQ96FX7 289 aaKnown RBP8.07□□□□□ -1.12
HERC1-206ENST00000559996 MARS2Q96GW9 593 aaKnown RBP8.07□□□□□ -1.12
HERC1-206ENST00000559996 MOV10Q9HCE1 1003 aaKnown RBP8.07□□□□□ -1.12
HERC1-206ENST00000559996 BRD7Q9NPI1 651 aa8.07□□□□□ -1.12
HERC1-206ENST00000559996 TRBV2A0A0J9YWF9 115 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 TRBV5-5A0A0J9YX44 114 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 A0A0U1RQV5 110 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 PNMA8CA0A1B0GUJ8 204 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.06□□□□□ -1.12
HERC1-206ENST00000559996 LOC110117498-PIK3R3F6TDL0 507 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 PIN1P1O15428 100 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 GPRIN2O60269 458 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 LMX1BO60663 402 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 APOC1P02654 83 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 LCATP04180 440 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 HSMCR30P0CW71 290 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 KIR2DL3P43628 341 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 TAS2R43P59537 309 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 RPS25P62851 125 aaKnown RBP8.06□□□□□ -1.12
HERC1-206ENST00000559996 FAM3AP98173 230 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 GK2Q14410 553 aaPredicted RBP8.06□□□□□ -1.12
HERC1-206ENST00000559996 ZNF829Q3KNS6 432 aaPredicted RBP8.06□□□□□ -1.12
HERC1-206ENST00000559996 ALKBH6Q3KRA9 238 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 SP5Q6BEB4 398 aaPredicted RBP8.06□□□□□ -1.12
HERC1-206ENST00000559996 ASPHD2Q6ICH7 369 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 ALKBH2Q6NS38 261 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 CD200R1LQ6Q8B3 271 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 OR1J2Q8NGS2 313 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 OR13C5Q8NGS8 318 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 OR14K1Q8NGZ2 314 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 OR2AE1Q8NHA4 323 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 OR51E1Q8TCB6 317 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 HAVCR2Q8TDQ0 301 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 NEUROG1Q92886 237 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 APOBEC3DQ96AK3 386 aaPredicted RBP8.06□□□□□ -1.12
HERC1-206ENST00000559996 LRRC46Q96FV0 321 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 MRPL48Q96GC5 212 aaKnown RBP8.06□□□□□ -1.12
HERC1-206ENST00000559996 PLPPR2Q96GM1 343 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 PSMG3-AS1Q96PY0 264 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 MYCBPQ99417 103 aaPredicted RBP8.06□□□□□ -1.12
HERC1-206ENST00000559996 SPOCK3Q9BQ16 436 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 NAA50Q9GZZ1 169 aaKnown RBP8.06□□□□□ -1.12
HERC1-206ENST00000559996 PPIL3Q9H2H8 161 aaKnown RBP8.06□□□□□ -1.12
HERC1-206ENST00000559996 TRIM36Q9NQ86 728 aa8.06□□□□□ -1.12
HERC1-206ENST00000559996 hCG_38984A0A1B0GV85 526 aa8.05□□□□□ -1.12
HERC1-206ENST00000559996 ATP6V1G2-DDX39BF2Z307 99 aa8.05□□□□□ -1.12
HERC1-206ENST00000559996 H3BSA7 217 aa8.05□□□□□ -1.12
HERC1-206ENST00000559996 J3QW42 95 aa8.05□□□□□ -1.12
HERC1-206ENST00000559996 P2RY10O00398 339 aa8.05□□□□□ -1.12
HERC1-206ENST00000559996 CCRL2O00421 344 aa8.05□□□□□ -1.12
HERC1-206ENST00000559996 ABCD4O14678 606 aa8.05□□□□□ -1.12
HERC1-206ENST00000559996 GPX5O75715 221 aa8.05□□□□□ -1.12
HERC1-206ENST00000559996 ANXA2P07355 339 aaKnown RBP8.05□□□□□ -1.12
HERC1-206ENST00000559996 FAM157BP0CG42 384 aa8.05□□□□□ -1.12
HERC1-206ENST00000559996 CD53P19397 219 aa8.05□□□□□ -1.12
HERC1-206ENST00000559996 ACKR3P25106 362 aa8.05□□□□□ -1.12
HERC1-206ENST00000559996 PSMB9P28065 219 aa8.05□□□□□ -1.12
HERC1-206ENST00000559996 MPV17P39210 176 aa8.05□□□□□ -1.12
HERC1-206ENST00000559996 SLC6A9P48067 706 aa8.05□□□□□ -1.12
HERC1-206ENST00000559996 FABP5Q01469 135 aa8.05□□□□□ -1.12
HERC1-206ENST00000559996 SLC3A1Q07837 685 aa8.05□□□□□ -1.12
HERC1-206ENST00000559996 HLXQ14774 488 aaPredicted RBP8.05□□□□□ -1.12
HERC1-206ENST00000559996 ODF4Q2M2E3 257 aa8.05□□□□□ -1.12
HERC1-206ENST00000559996 ARL9Q6T311 187 aa8.05□□□□□ -1.12
HERC1-206ENST00000559996 TMEM108Q6UXF1 575 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms