RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 HSD11B1P28845 292 aa12.54□□□□□ -0.4
RABGGTA-211ENST00000559850 ACTR3P61158 418 aa12.54□□□□□ -0.4
RABGGTA-211ENST00000559850 LMO4P61968 165 aa12.54□□□□□ -0.4
RABGGTA-211ENST00000559850 KDM4DQ6B0I6 523 aa12.54□□□□□ -0.4
RABGGTA-211ENST00000559850 PGAP1Q75T13 922 aa12.54□□□□□ -0.4
RABGGTA-211ENST00000559850 TCEANCQ8N8B7 351 aa12.54□□□□□ -0.4
RABGGTA-211ENST00000559850 LINC01356Q8N9X3 169 aa12.54□□□□□ -0.4
RABGGTA-211ENST00000559850 ZNF420Q8TAQ5 688 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-211ENST00000559850 DVL3Q92997 716 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-211ENST00000559850 SLC30A2Q9BRI3 323 aa12.54□□□□□ -0.4
RABGGTA-211ENST00000559850 TEX12Q9BXU0 123 aa12.54□□□□□ -0.4
RABGGTA-211ENST00000559850 TMEM106BQ9NUM4 274 aa12.54□□□□□ -0.4
RABGGTA-211ENST00000559850 GGT3PA6NGU5 568 aa12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 ZAR1LA6NP61 321 aa12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 PSMD9O00233 223 aa12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 PRODHO43272 600 aa12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 ESRRGP62508 458 aa12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 GFOD2Q3B7J2 385 aa12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 CHRFAM7AQ494W8 412 aa12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 FAM120AOSQ5T036 256 aa12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 SLX4IPQ5VYV7 408 aa12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 FAM57BQ71RH2 274 aa12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 OR13G1Q8NGZ3 307 aa12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 OTOSQ8NHW6 89 aa12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 RNF133Q8WVZ7 376 aa12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 SPRYD4Q8WW59 207 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 RAB1CQ92928 201 aa12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 CENPNQ96H22 339 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 C1orf159Q96HA4 380 aa12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 MEGF10Q96KG7 1140 aa12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 RIBC2Q9H4K1 309 aa12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 ZNF665Q9H7R5 613 aa12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 TMEM100Q9NV29 134 aa12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 UBAP1Q9NZ09 502 aa12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 ZNF319Q9P2F9 582 aa12.53□□□□□ -0.4
RABGGTA-211ENST00000559850 CD300LBA8K4G0 201 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 PRR32B1ATL7 298 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 ZNF205O95201 554 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 LYNP07948 512 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 H2BFMP0C1H6 154 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 SBK2P0C263 348 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 CA6P23280 308 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 OPRL1P41146 370 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 MMP16P51512 607 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 ZNF121P58317 390 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 GRB2P62993 217 aaKnown RBP12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 HOXA4Q00056 320 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 CR1LQ2VPA4 569 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 SLC35D3Q5M8T2 416 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 PRAMEF6Q5VXH4 476 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 C12orf73Q69YU5 71 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 LRRN1Q6UXK5 716 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 SHFQ7M4L6 423 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 MOGAT3Q86VF5 341 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 RFLNBQ8N5W9 214 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 TIMD4Q96H15 378 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 IL4I1Q96RQ9 567 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 TEAD3Q99594 435 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 GAL3ST1Q99999 423 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 BEX2Q9BXY8 128 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 SHARPINQ9H0F6 387 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 GCM1Q9NP62 436 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 IL19Q9UHD0 177 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 PPP1R3CQ9UQK1 317 aa12.52□□□□□ -0.41
RABGGTA-211ENST00000559850 ARHGAP32A7KAX9 2087 aa12.51□□□□□ -0.41
RABGGTA-211ENST00000559850 CYB5R3P00387 301 aaPredicted RBP12.51□□□□□ -0.41
RABGGTA-211ENST00000559850 TNFRSF1AP19438 455 aa12.51□□□□□ -0.41
RABGGTA-211ENST00000559850 SLC15A1P46059 708 aa12.51□□□□□ -0.41
RABGGTA-211ENST00000559850 FAM201AQ5SY85 155 aa12.51□□□□□ -0.41
RABGGTA-211ENST00000559850 OR56B2PQ8NGI1 322 aa12.51□□□□□ -0.41
RABGGTA-211ENST00000559850 SGK3Q96BR1 496 aa12.51□□□□□ -0.41
RABGGTA-211ENST00000559850 SIGLEC11Q96RL6 698 aa12.51□□□□□ -0.41
RABGGTA-211ENST00000559850 REPIN1Q9BWE0 567 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-211ENST00000559850 OSBPL10Q9BXB5 764 aa12.51□□□□□ -0.41
RABGGTA-211ENST00000559850 PPP1R3EQ9H7J1 279 aa12.51□□□□□ -0.41
RABGGTA-211ENST00000559850 LAMP5Q9UJQ1 280 aa12.51□□□□□ -0.41
RABGGTA-211ENST00000559850 COPS3Q9UNS2 423 aa12.51□□□□□ -0.41
RABGGTA-211ENST00000559850 NPTNQ9Y639 398 aa12.51□□□□□ -0.41
RABGGTA-211ENST00000559850 B4DSR2 109 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 MAGEB4O15481 346 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 IGHV2-70P01814 119 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 IGHV2-5P01817 119 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 MSMBP08118 114 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 ALOX5APP20292 161 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 PMELP40967 661 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 SRP9P49458 86 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 EFNB1P98172 346 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 SLC3A1Q07837 685 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 MAB21L1Q13394 359 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 ZMYND11Q15326 602 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 OR8G1Q15617 311 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 TIGD6Q17RP2 521 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 AADACL4Q5VUY2 407 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 SLC16A9Q7RTY1 509 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 PRSS45Q7RTY3 260 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 PEG10Q86TG7 708 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 ZNF454Q8N9F8 522 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 TMEM163Q8TC26 289 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 REEP6Q96HR9 211 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms