RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 TIMD4Q96H15 378 aa4.86□□□□□ -1.63
USP3-215ENST00000559771 C4orf45Q96LM5 186 aa4.86□□□□□ -1.63
USP3-215ENST00000559771 DCLRE1CQ96SD1 692 aaKnown RBP4.86□□□□□ -1.63
USP3-215ENST00000559771 GAL3ST1Q99999 423 aa4.86□□□□□ -1.63
USP3-215ENST00000559771 BCL7BQ9BQE9 202 aa4.86□□□□□ -1.63
USP3-215ENST00000559771 ALG12Q9BV10 488 aa4.86□□□□□ -1.63
USP3-215ENST00000559771 GABARAPL1Q9H0R8 117 aa4.86□□□□□ -1.63
USP3-215ENST00000559771 NTN4Q9HB63 628 aa4.86□□□□□ -1.63
USP3-215ENST00000559771 PATZ1Q9HBE1 687 aaKnown RBP4.86□□□□□ -1.63
USP3-215ENST00000559771 EMC7Q9NPA0 242 aa4.86□□□□□ -1.63
USP3-215ENST00000559771 IL1RAPQ9NPH3 570 aa4.86□□□□□ -1.63
USP3-215ENST00000559771 BAG5Q9UL15 447 aa4.86□□□□□ -1.63
USP3-215ENST00000559771 ZDHHC8Q9ULC8 765 aa4.86□□□□□ -1.63
USP3-215ENST00000559771 INSIG2Q9Y5U4 225 aa4.86□□□□□ -1.63
USP3-215ENST00000559771 NPTNQ9Y639 398 aa4.86□□□□□ -1.63
USP3-215ENST00000559771 CEPT1Q9Y6K0 416 aa4.86□□□□□ -1.63
USP3-215ENST00000559771 TRAV27A0A087WT01 109 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 MDFIC2A0A1B0GVS7 189 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 ISPDA4D126 451 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 H3BSA7 217 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 H7C1C5 153 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 J3KTA2 159 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 GNGT2O14610 69 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 CDC42EP2O14613 210 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 FOXH1O75593 365 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 PLATP00750 562 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 CST1P01037 141 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 IFNA14P01570 189 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 MT-ND5P03915 603 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 GSTP1P09211 210 aaKnown RBP4.85□□□□□ -1.63
USP3-215ENST00000559771 WNT2P09544 360 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 SBK2P0C263 348 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 CCDC159P0C7I6 412 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 IGHV4-38-2P0DP08 117 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 ATP6V1B1P15313 513 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 NCK1P16333 377 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 KITLGP21583 273 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 GCH1P30793 250 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 LIPAP38571 399 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 PMELP40967 661 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 TMBIM6P55061 237 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 TAS2R41P59536 307 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 CTXN1P60606 82 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 RPL27P61353 136 aaKnown RBP4.85□□□□□ -1.63
USP3-215ENST00000559771 LCN6P62502 163 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 TNFAIP6P98066 277 aaPredicted RBP4.85□□□□□ -1.63
USP3-215ENST00000559771 CD47Q08722 323 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 SLC9A3R2Q15599 337 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 RSPO1Q2MKA7 263 aaPredicted RBP4.85□□□□□ -1.63
USP3-215ENST00000559771 TMEM155Q4W5P6 130 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 ALG10Q5BKT4 473 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 MESTQ5EB52 335 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 ZNF773Q6PK81 442 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 TBPL2Q6SJ96 375 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 C9orf139Q6ZV77 190 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 FAM122BQ7Z309 247 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 JAZF1Q86VZ6 243 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 C8orf59Q8N0T1 100 aaPredicted RBP4.85□□□□□ -1.63
USP3-215ENST00000559771 TEX29Q8N6K0 151 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 OR13C2Q8NGS9 318 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 OR51A7Q8NH64 312 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 ITLN1Q8WWA0 313 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 CYGBQ8WWM9 190 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 RASSF5Q8WWW0 418 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 SLC7A6Q92536 515 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 BPIFA2Q96DR5 249 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 SAMD8Q96LT4 415 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 POLR2J2Q9GZM3 115 aaKnown RBP4.85□□□□□ -1.63
USP3-215ENST00000559771 EGLN1Q9GZT9 426 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 POLR2J3Q9H1A7 115 aaKnown RBP4.85□□□□□ -1.63
USP3-215ENST00000559771 CCNB1IP1Q9NPC3 277 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 POLE4Q9NR33 117 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 CYSLTR2Q9NS75 346 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 TMEM106BQ9NUM4 274 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 TBCCD1Q9NVR7 557 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 PLEK2Q9NYT0 353 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 CGGBP1Q9UFW8 167 aaPredicted RBP4.85□□□□□ -1.63
USP3-215ENST00000559771 ENOPH1Q9UHY7 261 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 NUP50Q9UKX7 468 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 STARD10Q9Y365 291 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 MED31Q9Y3C7 131 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 ADAM18Q9Y3Q7 739 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 TIMM10BQ9Y5J6 103 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 AUP1Q9Y679 476 aa4.85□□□□□ -1.63
USP3-215ENST00000559771 IGHV3OR16-10A0A075B7F0 116 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 A0A087WUU8 490 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 A0A1B0GWJ7 208 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 A0A1W2PPL8 197 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 PLSCR5A0PG75 271 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 OR6C6A6NF89 314 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 CCDC160A6NGH7 325 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 CEACAM18A8MTB9 384 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 H0YL77 283 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 TMEM178BH3BS89 294 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 CLDN34H7C241 214 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 MLNRO43193 412 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 NOL3O60936 208 aaKnown RBP4.84□□□□□ -1.63
USP3-215ENST00000559771 E2F6O75461 281 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 DBHP09172 617 aa4.84□□□□□ -1.63
USP3-215ENST00000559771 COX5BP10606 129 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms