RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 SNAI3Q3KNW1 292 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 KRTAP27-1Q3LI81 207 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 TEX30Q5JUR7 227 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 GLYATL3Q5SZD4 288 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 LINC01590Q5TEZ4 76 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 COLCA1Q6ZS62 124 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 CXXC5Q7LFL8 322 aaKnown RBP6.92□□□□□ -1.3
SNX1-207ENST00000559401 SHFQ7M4L6 423 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 AMIGO2Q86SJ2 522 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 MOGAT3Q86VF5 341 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.92□□□□□ -1.3
SNX1-207ENST00000559401 KLHL36Q8N4N3 616 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 SPICQ8N5J4 248 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 THEM6Q8WUY1 208 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 DNAJC9Q8WXX5 260 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 C1orf159Q96HA4 380 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 KCNJ15Q99712 375 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 SLC30A2Q9BRI3 323 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 ADAT1Q9BUB4 502 aaKnown RBP6.92□□□□□ -1.3
SNX1-207ENST00000559401 ABHD6Q9BV23 337 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 PRRG3Q9BZD7 231 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 MMADHCQ9H3L0 296 aaPredicted RBP6.92□□□□□ -1.3
SNX1-207ENST00000559401 TVP23BQ9NYZ1 205 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 NOP16Q9Y3C1 178 aaKnown RBP6.92□□□□□ -1.3
SNX1-207ENST00000559401 AP4S1Q9Y587 144 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 A0A0G2JMP0 313 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 A0A0X1KG70 313 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 LRRC30A6NM36 301 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 CD300LBA8K4G0 201 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 G3V2T6 193 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 IFNL4K9M1U5 179 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 PHF1O43189 567 aaPredicted RBP6.91□□□□□ -1.3
SNX1-207ENST00000559401 PRODHO43272 600 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 XRCC2O43543 280 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 PLPP2O43688 288 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 SELENOFO60613 162 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 ZNF205O95201 554 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 CYB5R3P00387 301 aaPredicted RBP6.91□□□□□ -1.3
SNX1-207ENST00000559401 PNPP00491 289 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 IGHV2-70P01814 119 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 APOC1P02654 83 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 LYNP07948 512 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 MRPL3P09001 348 aaKnown RBP6.91□□□□□ -1.3
SNX1-207ENST00000559401 FCGR1AP12314 374 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 CA6P23280 308 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 OTX1P32242 354 aaPredicted RBP6.91□□□□□ -1.3
SNX1-207ENST00000559401 DAPP51397 102 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 CRISP1P54107 249 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 BTG1P62324 171 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 CDK5Q00535 292 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 APOFQ13790 326 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 ATP6AP1Q15904 470 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 PCK2Q16822 640 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 LCN1P1Q5VSP4 162 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 DCAF12L2Q5VW00 463 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 PRAMEF6Q5VXH4 476 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 CCDC121Q6ZUS5 278 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 FAM57BQ71RH2 274 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 ZDHHC13Q8IUH4 622 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 C1orf87Q8N0U7 546 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 MUC20Q8N307 709 aaPredicted RBP6.91□□□□□ -1.3
SNX1-207ENST00000559401 BOLLQ8N9W6 283 aaKnown RBP6.91□□□□□ -1.3
SNX1-207ENST00000559401 BBS1Q8NFJ9 593 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 OR4M2Q8NGB6 313 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 OR56B2PQ8NGI1 322 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 OR11L1Q8NGX0 322 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 LRTOMTQ8WZ04 291 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 DVL3Q92997 716 aaPredicted RBP6.91□□□□□ -1.3
SNX1-207ENST00000559401 NRBF2Q96F24 287 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 PGAM5Q96HS1 289 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 AMELYQ99218 206 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 MDFIQ99750 246 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 SEMA6AQ9H2E6 1030 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 TOR3AQ9H497 397 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 OPA3Q9H6K4 179 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 METTL17Q9H7H0 456 aaPredicted RBP6.91□□□□□ -1.3
SNX1-207ENST00000559401 SP140LQ9H930 580 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 NTN4Q9HB63 628 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 SLC25A19Q9HC21 320 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 GCM1Q9NP62 436 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 UFSP2Q9NUQ7 469 aa6.91□□□□□ -1.3
SNX1-207ENST00000559401 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.9□□□□□ -1.3
SNX1-207ENST00000559401 C5orf63A6NC05 138 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 SAC3D1A6NKF1 404 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 A6NLC8 198 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 ANKRD30BLA7E2S9 258 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 TMEM178BH3BS89 294 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 M0R129 80 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 MITFO75030 526 aaPredicted RBP6.9□□□□□ -1.3
SNX1-207ENST00000559401 FOXH1O75593 365 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 RPS2P15880 293 aaKnown RBP6.9□□□□□ -1.3
SNX1-207ENST00000559401 ANOS1P23352 680 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 MDH2P40926 338 aaKnown RBP6.9□□□□□ -1.3
SNX1-207ENST00000559401 ZNF121P58317 390 aaPredicted RBP6.9□□□□□ -1.3
SNX1-207ENST00000559401 SRSF2Q01130 221 aaKnown RBP6.9□□□□□ -1.3
SNX1-207ENST00000559401 PTGES3Q15185 160 aaKnown RBP6.9□□□□□ -1.3
SNX1-207ENST00000559401 ZMYND11Q15326 602 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 TMEM155Q4W5P6 130 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 ESCO2Q56NI9 601 aa6.9□□□□□ -1.3
SNX1-207ENST00000559401 SLC35D3Q5M8T2 416 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms