RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 LOXL1Q08397 574 aaPredicted RBP6.81□□□□□ -1.32
CASC4-208ENST00000559151 TFDP2Q14188 446 aa6.81□□□□□ -1.32
CASC4-208ENST00000559151 OR8U1Q8NH10 309 aa6.81□□□□□ -1.32
CASC4-208ENST00000559151 TOP1MTQ969P6 601 aa6.81□□□□□ -1.32
CASC4-208ENST00000559151 BTN2A3PQ96KV6 586 aa6.81□□□□□ -1.32
CASC4-208ENST00000559151 GPR21Q99679 349 aa6.81□□□□□ -1.32
CASC4-208ENST00000559151 ZMAT5Q9UDW3 170 aaKnown RBP6.81□□□□□ -1.32
CASC4-208ENST00000559151 NEURL4Q96JN8 1562 aa6.81□□□□□ -1.32
CASC4-208ENST00000559151 TRAV6A0A075B6T7 132 aa6.8□□□□□ -1.32
CASC4-208ENST00000559151 CTDNEP1O95476 244 aa6.8□□□□□ -1.32
CASC4-208ENST00000559151 CATP04040 527 aaKnown RBP6.8□□□□□ -1.32
CASC4-208ENST00000559151 PPICP45877 212 aa6.8□□□□□ -1.32
CASC4-208ENST00000559151 RBMY1FQ15415 496 aaKnown RBP6.8□□□□□ -1.32
CASC4-208ENST00000559151 STK11Q15831 433 aa6.8□□□□□ -1.32
CASC4-208ENST00000559151 TFDP3Q5H9I0 405 aa6.8□□□□□ -1.32
CASC4-208ENST00000559151 MLIPQ5VWP3 458 aa6.8□□□□□ -1.32
CASC4-208ENST00000559151 LINC00336Q6ZUF6 198 aa6.8□□□□□ -1.32
CASC4-208ENST00000559151 KIF27Q86VH2 1401 aa6.8□□□□□ -1.32
CASC4-208ENST00000559151 SCGB3A2Q96PL1 93 aa6.8□□□□□ -1.32
CASC4-208ENST00000559151 ZNF382Q96SR6 550 aa6.8□□□□□ -1.32
CASC4-208ENST00000559151 HSD17B10Q99714 261 aaKnown RBP6.8□□□□□ -1.32
CASC4-208ENST00000559151 TMEM27Q9HBJ8 222 aa6.8□□□□□ -1.32
CASC4-208ENST00000559151 RGS18Q9NS28 235 aa6.8□□□□□ -1.32
CASC4-208ENST00000559151 ZNRD1Q9P1U0 126 aa6.8□□□□□ -1.32
CASC4-208ENST00000559151 IGHV1-69DA0A0B4J2H0 117 aa6.79□□□□□ -1.32
CASC4-208ENST00000559151 A0A1W2PPV4 95 aa6.79□□□□□ -1.32
CASC4-208ENST00000559151 RAD51BO15315 384 aa6.79□□□□□ -1.32
CASC4-208ENST00000559151 SLC16A7O60669 478 aa6.79□□□□□ -1.32
CASC4-208ENST00000559151 KIR3DL2P43630 455 aa6.79□□□□□ -1.32
CASC4-208ENST00000559151 NKAIN1Q4KMZ8 207 aa6.79□□□□□ -1.32
CASC4-208ENST00000559151 RWDD4Q6NW29 188 aaKnown RBP6.79□□□□□ -1.32
CASC4-208ENST00000559151 SNX20Q7Z614 316 aa6.79□□□□□ -1.32
CASC4-208ENST00000559151 CALHM1Q8IU99 346 aa6.79□□□□□ -1.32
CASC4-208ENST00000559151 TMEM104Q8NE00 496 aa6.79□□□□□ -1.32
CASC4-208ENST00000559151 FOPNLQ96NB1 174 aa6.79□□□□□ -1.32
CASC4-208ENST00000559151 ZNF355PQ9NSJ1 428 aa6.79□□□□□ -1.32
CASC4-208ENST00000559151 HYOU1Q9Y4L1 999 aa6.79□□□□□ -1.32
CASC4-208ENST00000559151 IGHV3OR16-9A0A0B4J2B5 98 aa6.78□□□□□ -1.32
CASC4-208ENST00000559151 A0A0U1RQV1 116 aa6.78□□□□□ -1.32
CASC4-208ENST00000559151 TAS2R46P59540 309 aa6.78□□□□□ -1.32
CASC4-208ENST00000559151 C5orf64Q2M2E5 130 aa6.78□□□□□ -1.32
CASC4-208ENST00000559151 ZNF829Q3KNS6 432 aaPredicted RBP6.78□□□□□ -1.32
CASC4-208ENST00000559151 ZNF691Q5VV52 312 aa6.78□□□□□ -1.32
CASC4-208ENST00000559151 AGMATQ9BSE5 352 aa6.78□□□□□ -1.32
CASC4-208ENST00000559151 ZNF430Q9H8G1 570 aaPredicted RBP6.78□□□□□ -1.32
CASC4-208ENST00000559151 DDX19AQ9NUU7 478 aaKnown RBP6.78□□□□□ -1.32
CASC4-208ENST00000559151 MED6O75586 246 aa6.77□□□□□ -1.33
CASC4-208ENST00000559151 FOXH1O75593 365 aa6.77□□□□□ -1.33
CASC4-208ENST00000559151 TGM6O95932 706 aa6.77□□□□□ -1.33
CASC4-208ENST00000559151 GLAP06280 429 aa6.77□□□□□ -1.33
CASC4-208ENST00000559151 PSMC3P17980 439 aa6.77□□□□□ -1.33
CASC4-208ENST00000559151 BMI1P35226 326 aa6.77□□□□□ -1.33
CASC4-208ENST00000559151 RPL23P62829 140 aaKnown RBP6.77□□□□□ -1.33
CASC4-208ENST00000559151 EBI3Q14213 229 aa6.77□□□□□ -1.33
CASC4-208ENST00000559151 TPRG1LQ5T0D9 272 aa6.77□□□□□ -1.33
CASC4-208ENST00000559151 CDKL3Q8IVW4 592 aaPredicted RBP6.77□□□□□ -1.33
CASC4-208ENST00000559151 FBXO36Q8NEA4 188 aa6.77□□□□□ -1.33
CASC4-208ENST00000559151 TCP10LQ8TDR4 215 aa6.77□□□□□ -1.33
CASC4-208ENST00000559151 FLYWCH2Q96CP2 140 aaKnown RBP6.77□□□□□ -1.33
CASC4-208ENST00000559151 RBMXL1Q96E39 390 aaKnown RBP6.77□□□□□ -1.33
CASC4-208ENST00000559151 NEURL3Q96EH8 262 aa6.77□□□□□ -1.33
CASC4-208ENST00000559151 OR52D1Q9H346 318 aa6.77□□□□□ -1.33
CASC4-208ENST00000559151 KPTNQ9Y664 436 aa6.77□□□□□ -1.33
CASC4-208ENST00000559151 COMMD3-BMI1R4GMX3 469 aa6.77□□□□□ -1.33
CASC4-208ENST00000559151 HECW2Q9P2P5 1572 aa6.77□□□□□ -1.33
CASC4-208ENST00000559151 TRAV19A0A0A6YYK7 116 aa6.76□□□□□ -1.33
CASC4-208ENST00000559151 A0A1B0GUH1 482 aa6.76□□□□□ -1.33
CASC4-208ENST00000559151 TMEM223A0PJW6 202 aa6.76□□□□□ -1.33
CASC4-208ENST00000559151 SLC19A2O60779 497 aa6.76□□□□□ -1.33
CASC4-208ENST00000559151 REM1O75628 298 aa6.76□□□□□ -1.33
CASC4-208ENST00000559151 YIF1AO95070 293 aa6.76□□□□□ -1.33
CASC4-208ENST00000559151 SNAI1O95863 264 aaPredicted RBP6.76□□□□□ -1.33
CASC4-208ENST00000559151 WDR86Q86TI4 376 aa6.76□□□□□ -1.33
CASC4-208ENST00000559151 WDFY1Q8IWB7 410 aa6.76□□□□□ -1.33
CASC4-208ENST00000559151 OR6N1Q8NGY5 312 aa6.76□□□□□ -1.33
CASC4-208ENST00000559151 ZNF75CPQ92670 426 aaPredicted RBP6.76□□□□□ -1.33
CASC4-208ENST00000559151 HAUS1Q96CS2 278 aa6.76□□□□□ -1.33
CASC4-208ENST00000559151 ZNF488Q96MN9 340 aa6.76□□□□□ -1.33
CASC4-208ENST00000559151 SAMD10Q9BYL1 202 aa6.76□□□□□ -1.33
CASC4-208ENST00000559151 SLC38A10Q9HBR0 1119 aa6.76□□□□□ -1.33
CASC4-208ENST00000559151 RRAGDQ9NQL2 400 aaPredicted RBP6.76□□□□□ -1.33
CASC4-208ENST00000559151 YTHDF2Q9Y5A9 579 aaKnown RBP6.76□□□□□ -1.33
CASC4-208ENST00000559151 TMEM14AQ9Y6G1 99 aa6.76□□□□□ -1.33
CASC4-208ENST00000559151 IGSF9BQ9UPX0 1349 aa6.76□□□□□ -1.33
CASC4-208ENST00000559151 IGHV1OR15-9A0A0B4J2B8 117 aa6.75□□□□□ -1.33
CASC4-208ENST00000559151 H3BN98 237 aa6.75□□□□□ -1.33
CASC4-208ENST00000559151 IGFBP3P17936 291 aaPredicted RBP6.75□□□□□ -1.33
CASC4-208ENST00000559151 CD70P32970 193 aa6.75□□□□□ -1.33
CASC4-208ENST00000559151 MYCNOSP40205 109 aa6.75□□□□□ -1.33
CASC4-208ENST00000559151 CLDN6P56747 220 aa6.75□□□□□ -1.33
CASC4-208ENST00000559151 CARD18P57730 90 aa6.75□□□□□ -1.33
CASC4-208ENST00000559151 CDK5Q00535 292 aa6.75□□□□□ -1.33
CASC4-208ENST00000559151 SYNPRQ8TBG9 265 aa6.75□□□□□ -1.33
CASC4-208ENST00000559151 TNIKQ9UKE5 1360 aa6.74□□□□□ -1.33
CASC4-208ENST00000559151 KLK1P06870 262 aa6.74□□□□□ -1.33
CASC4-208ENST00000559151 ADRA2AP08913 450 aa6.74□□□□□ -1.33
CASC4-208ENST00000559151 OR8U9P0C7N5 309 aa6.74□□□□□ -1.33
CASC4-208ENST00000559151 OR56A5P0C7T3 313 aa6.74□□□□□ -1.33
CASC4-208ENST00000559151 STAG3L2P0CL84 134 aa6.74□□□□□ -1.33
CASC4-208ENST00000559151 GFERP55789 205 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms