RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 HS3ST1O14792 307 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 SRSF10O75494 262 aaKnown RBP5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 CTAG2O75638 210 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 PNPP00491 289 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 PLAUP00749 431 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 OR4A8P0C604 315 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 UBCP0CG48 685 aaKnown RBP5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 HSMCR30P0CW71 290 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 SELEP16581 610 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 CFL1P23528 166 aaKnown RBP5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 LOXP28300 417 aaPredicted RBP5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 SSTR2P30874 369 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 THBS4P35443 961 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 TGM4P49221 684 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 FABP6P51161 128 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 CCR9P51686 369 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 KLF3P57682 345 aaPredicted RBP5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 ERVS71-1P61550 626 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 BDH1Q02338 343 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 ALKBH1Q13686 389 aaKnown RBP5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 SPHARQ15513 63 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 ODF4Q2M2E3 257 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 CCDC58Q4VC31 144 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 WDR38Q5JTN6 314 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 GLYATL3Q5SZD4 288 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 RPL22L1Q6P5R6 122 aaKnown RBP5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 COLCA1Q6ZS62 124 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 PGAP1Q75T13 922 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 ZNF367Q7RTV3 350 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 ELMOD2Q8IZ81 293 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 SPARTQ8N0X7 666 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 FBXL14Q8N1E6 418 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 ZNF676Q8N7Q3 588 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 OR2G2Q8NGZ5 317 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 OR2AE1Q8NHA4 323 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 SYNPRQ8TBG9 265 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 OR51E1Q8TCB6 317 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 FCGR1BQ92637 280 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 RORBQ92753 470 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 NEUROG1Q92886 237 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 MARVELD3Q96A59 401 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 REEP6Q96HR9 211 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 OR5M11Q96RB7 305 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 DHRS9Q9BPW9 319 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 OR2J1Q9GZK6 312 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 CLEC4MQ9H2X3 399 aaPredicted RBP5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 PLK3Q9H4B4 646 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 RGCCQ9H4X1 137 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 ZNF442Q9H7R0 627 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 UBTD1Q9HAC8 227 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 ACOT13Q9NPJ3 140 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 G6PC2Q9NQR9 355 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 DUSP13Q9UII6 198 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 ZNF391Q9UJN7 358 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 FZR1Q9UM11 496 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 SLC22A13Q9Y226 551 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 CADP27708 2225 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 ABCA4P78363 2273 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 LRBAP50851 2863 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 ROS1P08922 2347 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 PLCE1Q9P212 2302 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 ASH1LQ9NR48 2969 aaKnown RBP5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 BAHCC1Q9P281 2608 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 A0A0U1RQV5 110 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 PNMA8CA0A1B0GUJ8 204 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 LOC107986453A0A1B0GWG9 222 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 FAM221AA4D161 298 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 C5orf63A6NC05 138 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 TRIM64A6NGJ6 449 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 GGT3PA6NGU5 568 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 TMEM212A6NML5 194 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 E9PI62 339 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 P2RY10O00398 339 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 SYT7O43581 403 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 TIMM8AO60220 97 aaPredicted RBP5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 MTRF1O75570 445 aaKnown RBP5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 LALBAP00709 142 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 TTRP02766 147 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 RPSAP08865 295 aaKnown RBP5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 RAC2P15153 192 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 ATP6V1B1P15313 513 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 ACHEP22303 614 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 PSMB9P28065 219 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 APOBEC3AP31941 199 aaPredicted RBP5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 SERPINF1P36955 418 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 MPV17P39210 176 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 KIR3DL2P43630 455 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 GTF2A1P52655 376 aaPredicted RBP5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 NANOS3P60323 173 aaKnown RBP5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 ZNF92Q03936 586 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 EMX1Q04741 257 aaPredicted RBP5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 SLC3A1Q07837 685 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 ACSM1Q08AH1 577 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 MLLT11Q13015 90 aaPredicted RBP5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 DOC2BQ14184 412 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 GK2Q14410 553 aaPredicted RBP5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 HLXQ14774 488 aaPredicted RBP5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 CDK5R1Q15078 307 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 NEDD8Q15843 81 aa5.67□□□□□ -1.5
CHRNA3-204ENST00000559002 MOGQ16653 247 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms