RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 FOXL2NBQ6ZUU3 175 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 PTCHD4Q6ZW05 846 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 TMPRSS11FQ6ZWK6 438 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 FAM122BQ7Z309 247 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 TSEN54Q7Z6J9 526 aaKnown RBP6.17□□□□□ -1.42
SPG11-213ENST00000558988 ZER1Q7Z7L7 766 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 GLB1L2Q8IW92 636 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 NPEPL1Q8NDH3 523 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 SEMA6DQ8NFY4 1073 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 OR1F12Q8NHA8 337 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 ZNF420Q8TAQ5 688 aaPredicted RBP6.17□□□□□ -1.42
SPG11-213ENST00000558988 FANK1Q8TC84 345 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 OR2V2Q96R30 315 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 IFT27Q9BW83 186 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 NUAK2Q9H093 628 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 CCDC134Q9H6E4 229 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 SPAG4Q9NPE6 437 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 KRCC1Q9NPI7 259 aaPredicted RBP6.17□□□□□ -1.42
SPG11-213ENST00000558988 G6PC2Q9NQR9 355 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 TMEM106BQ9NUM4 274 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 NDUFAF4Q9P032 175 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 ZDHHC8Q9ULC8 765 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 PPP1R3CQ9UQK1 317 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 SIGLEC7Q9Y286 467 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 PPIAL4AQ9Y536 164 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 NPTNQ9Y639 398 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 FBN3Q75N90 2809 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 MXRA5Q9NR99 2828 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 A0A1W2PRQ8 180 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 H0YL77 283 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 TRIM77I1YAP6 450 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 DCTN6O00399 190 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 NDUFAB1O14561 156 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 OR10H3O60404 316 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 GADD45GO95257 159 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 CYB5R3P00387 301 aaPredicted RBP6.16□□□□□ -1.42
SPG11-213ENST00000558988 RENP00797 406 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 HLA-DPB1P04440 258 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 SELEP16581 610 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 RHCEP18577 417 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 ZFP36P26651 326 aaKnown RBP6.16□□□□□ -1.42
SPG11-213ENST00000558988 LIPAP38571 399 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 CDKN2AP42771 156 aaKnown RBP6.16□□□□□ -1.42
SPG11-213ENST00000558988 OMPP47874 163 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 DGCR6Q14129 220 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 ZMYND11Q15326 602 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 CCDC92Q53HC0 331 aaPredicted RBP6.16□□□□□ -1.42
SPG11-213ENST00000558988 CLEC12AQ5QGZ9 265 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 GPR139Q6DWJ6 353 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 DNM1P34Q6PK57 102 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 C1QL2Q7Z5L3 287 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 CPLX4Q7Z7G2 160 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 LNX2Q8N448 690 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 C3orf56Q8N813 242 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 BOLLQ8N9W6 283 aaKnown RBP6.16□□□□□ -1.42
SPG11-213ENST00000558988 C19orf18Q8NEA5 215 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 OR4K13Q8NH42 304 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 NANPQ8TBE9 248 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 CMTM5Q96DZ9 223 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 CLUHP3Q96NS8 147 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 NMNAT3Q96T66 252 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 PITX2Q99697 317 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 GPA33Q99795 319 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 SUCNR1Q9BXA5 334 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 C1QTNF5Q9BXJ0 243 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 MED4Q9NPJ6 270 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 NRIP3Q9NQ35 241 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 RPRD1BQ9NQG5 326 aaKnown RBP6.16□□□□□ -1.42
SPG11-213ENST00000558988 MMP26Q9NRE1 261 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 TBCCD1Q9NVR7 557 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 SAMD4AQ9UPU9 718 aaKnown RBP6.16□□□□□ -1.42
SPG11-213ENST00000558988 N6AMT1Q9Y5N5 214 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 TANC2Q9HCD6 1990 aa6.16□□□□□ -1.42
SPG11-213ENST00000558988 OR6C6A6NF89 314 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 F5H5K5 113 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 F5H5P2 479 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 H3BSA7 217 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 ARPC2O15144 300 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 SURF4O15260 269 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 PTP4A3O75365 173 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 FOXH1O75593 365 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 IGHV2-70P01814 119 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 CD55P08174 381 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 COX5BP10606 129 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 HIST1H1CP16403 213 aaKnown RBP6.15□□□□□ -1.42
SPG11-213ENST00000558988 KITLGP21583 273 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 RRM2P31350 389 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 SLC6A6P31641 620 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 PYCR1P32322 319 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 RPS27P42677 84 aaKnown RBP6.15□□□□□ -1.42
SPG11-213ENST00000558988 SLC6A9P48067 706 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 FXYD6P3P58550 94 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 HILS1P60008 231 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 BTG1P62324 171 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 ESCO2Q56NI9 601 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 FAM201AQ5SY85 155 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 C8orf82Q6P1X6 216 aaPredicted RBP6.15□□□□□ -1.42
SPG11-213ENST00000558988 RBMS3Q6XE24 437 aaKnown RBP6.15□□□□□ -1.42
SPG11-213ENST00000558988 HACD2Q6Y1H2 254 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 DPY19L2P2Q6ZN68 376 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms