RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 SIGLEC11Q96RL6 698 aa10.67□□□□□ -0.7
GABPB1-208ENST00000558970 CCL19Q99731 98 aa10.67□□□□□ -0.7
GABPB1-208ENST00000558970 PBOV1Q9GZY1 135 aa10.67□□□□□ -0.7
GABPB1-208ENST00000558970 NIPAL2Q9H841 368 aa10.67□□□□□ -0.7
GABPB1-208ENST00000558970 FAIMQ9NVQ4 179 aa10.67□□□□□ -0.7
GABPB1-208ENST00000558970 TBCCD1Q9NVR7 557 aa10.67□□□□□ -0.7
GABPB1-208ENST00000558970 FAM206AQ9NX38 181 aa10.67□□□□□ -0.7
GABPB1-208ENST00000558970 PLEKHA6Q9Y2H5 1048 aa10.67□□□□□ -0.7
GABPB1-208ENST00000558970 EXOSC1Q9Y3B2 195 aaKnown RBP10.67□□□□□ -0.7
GABPB1-208ENST00000558970 R4GMQ9 66 aa10.67□□□□□ -0.7
GABPB1-208ENST00000558970 ABCA4P78363 2273 aa10.67□□□□□ -0.7
GABPB1-208ENST00000558970 MTORP42345 2549 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 PNMA8CA0A1B0GUJ8 204 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 RGS10O43665 173 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 TIMM8AO60220 97 aaPredicted RBP10.66□□□□□ -0.7
GABPB1-208ENST00000558970 APOC1P02654 83 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 CCDC159P0C7I6 412 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 ALDH3B1P43353 468 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 SLC35A2P78381 396 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 ZNF92Q03936 586 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 GK2Q14410 553 aaPredicted RBP10.66□□□□□ -0.7
GABPB1-208ENST00000558970 NKPD1Q17RQ9 610 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 RBM48Q5RL73 367 aaKnown RBP10.66□□□□□ -0.7
GABPB1-208ENST00000558970 ZNF684Q5T5D7 378 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 OR2T2Q6IF00 324 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 ZNF544Q6NX49 715 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 PGAP1Q75T13 922 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 RHOUQ7L0Q8 258 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 PRSS45Q7RTY3 260 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 KLBQ86Z14 1044 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 ZCCHC24Q8N2G6 241 aaKnown RBP10.66□□□□□ -0.7
GABPB1-208ENST00000558970 KLHL36Q8N4N3 616 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 ZNF611Q8N823 705 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 ZFP41Q8N8Y5 198 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 GATAD2BQ8WXI9 593 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 RORBQ92753 470 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 PELI1Q96FA3 418 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 REEP6Q96HR9 211 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 ZNF649Q9BS31 505 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 SOX7Q9BT81 388 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 OR10A2Q9H208 303 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 TPK1Q9H3S4 243 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 ZNF442Q9H7R0 627 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 DYNLRB1Q9NP97 96 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 INPP5EQ9NRR6 644 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 FKBP14Q9NWM8 211 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 TAAR3PQ9P1P4 343 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 OR52A1Q9UKL2 312 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 BLOC1S6Q9UL45 172 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 SETD2Q9BYW2 2564 aaPredicted RBP10.66□□□□□ -0.7
GABPB1-208ENST00000558970 PLCE1Q9P212 2302 aa10.66□□□□□ -0.7
GABPB1-208ENST00000558970 VSTM5A8MXK1 200 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 E9PI62 339 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 P2RY10O00398 339 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 ICMTO60725 284 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 SRSF10O75494 262 aaKnown RBP10.65□□□□□ -0.7
GABPB1-208ENST00000558970 SULT1C4O75897 302 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 CD8AP01732 235 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 HTR1AP08908 422 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 TACSTD2P09758 323 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 DANCRP0C864 163 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 NAT2P11245 290 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 MAP2K4P45985 399 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 GTF2A1P52655 376 aaPredicted RBP10.65□□□□□ -0.7
GABPB1-208ENST00000558970 CDH15P55291 814 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 SNRPD2P62316 118 aaKnown RBP10.65□□□□□ -0.7
GABPB1-208ENST00000558970 CSNK2BP67870 215 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 PSG7Q13046 419 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 WDR38Q5JTN6 314 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 AGAP6Q5VW22 663 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 XAF1Q6GPH4 301 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 DEGS2Q6QHC5 323 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 TMPRSS11AQ6ZMR5 421 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 COLCA1Q6ZS62 124 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 CATSPERDQ86XM0 798 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 PRSS35Q8N3Z0 413 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 OR51E1Q8TCB6 317 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 SGK3Q96BR1 496 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 FAM71F1Q96KD3 344 aaPredicted RBP10.65□□□□□ -0.7
GABPB1-208ENST00000558970 LURAP1Q96LR2 239 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 VRK1Q99986 396 aaPredicted RBP10.65□□□□□ -0.7
GABPB1-208ENST00000558970 TRAF4Q9BUZ4 470 aaPredicted RBP10.65□□□□□ -0.7
GABPB1-208ENST00000558970 CACNG6Q9BXT2 260 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 G6PC2Q9NQR9 355 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 CBLN4Q9NTU7 201 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 SNX5Q9Y5X3 404 aa10.65□□□□□ -0.7
GABPB1-208ENST00000558970 ROS1P08922 2347 aa10.64□□□□□ -0.71
GABPB1-208ENST00000558970 CCDC168Q8NDH2 2452 aa10.64□□□□□ -0.71
GABPB1-208ENST00000558970 CHD3Q12873 2000 aaKnown RBP10.64□□□□□ -0.71
GABPB1-208ENST00000558970 CSMD2Q7Z408 3487 aa10.64□□□□□ -0.71
GABPB1-208ENST00000558970 TMEM129A0AVI4 362 aa10.64□□□□□ -0.71
GABPB1-208ENST00000558970 GGT3PA6NGU5 568 aa10.64□□□□□ -0.71
GABPB1-208ENST00000558970 XRCC2O43543 280 aa10.64□□□□□ -0.71
GABPB1-208ENST00000558970 LILRA1O75019 489 aa10.64□□□□□ -0.71
GABPB1-208ENST00000558970 TTRP02766 147 aa10.64□□□□□ -0.71
GABPB1-208ENST00000558970 MT-ND5P03915 603 aa10.64□□□□□ -0.71
GABPB1-208ENST00000558970 ZNF250P15622 560 aa10.64□□□□□ -0.71
GABPB1-208ENST00000558970 KIR3DL2P43630 455 aa10.64□□□□□ -0.71
GABPB1-208ENST00000558970 GBX2P52951 348 aaPredicted RBP10.64□□□□□ -0.71
GABPB1-208ENST00000558970 SELENOVP59797 346 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms