RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 CEACAM18A8MTB9 384 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 IQCF6A8MYZ5 107 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 TMEM178BH3BS89 294 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 DCTN6O00399 190 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 ATP8B1O43520 1251 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 IDH3BO43837 385 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 SNX3O60493 162 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 HLA-DQA2P01906 255 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 OSMP13725 252 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 RPS2P15880 293 aaKnown RBP6.77□□□□□ -1.33
TRAF3-205ENST00000558700 HIST1H1CP16403 213 aaKnown RBP6.77□□□□□ -1.33
TRAF3-205ENST00000558700 ZNF12P17014 697 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 CFPP27918 469 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 RRM2P31350 389 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 GSSP48637 474 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 UBA52P62987 128 aaKnown RBP6.77□□□□□ -1.33
TRAF3-205ENST00000558700 MALLQ13021 153 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 ZNF154Q13106 437 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 HLXQ14774 488 aaPredicted RBP6.77□□□□□ -1.33
TRAF3-205ENST00000558700 RFX4Q33E94 735 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 SPATS1Q496A3 300 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 CT83Q5H943 113 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 OR2T2Q6IF00 324 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 SLC18B1Q6NT16 456 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 CORO6Q6QEF8 472 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 C16orf89Q6UX73 402 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 BTNL3Q6UXE8 466 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 CFAP77Q6ZQR2 320 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 LRRC28Q86X40 367 aaPredicted RBP6.77□□□□□ -1.33
TRAF3-205ENST00000558700 LINC00346Q8IVM7 164 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 ZDHHC21Q8IVQ6 265 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 OR6V1Q8N148 313 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 BHLHE23Q8NDY6 225 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 SDR9C7Q8NEX9 313 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 OR4K13Q8NH42 304 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 PLEKHA8Q96JA3 519 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 HRASLS5Q96KN8 279 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 C16orf92Q96LL3 132 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 NMNAT3Q96T66 252 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 PITX2Q99697 317 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 GPA33Q99795 319 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 SLC30A2Q9BRI3 323 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 SSBP3Q9BWW4 388 aaPredicted RBP6.77□□□□□ -1.33
TRAF3-205ENST00000558700 C1QTNF5Q9BXJ0 243 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 GCM1Q9NP62 436 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 DDX28Q9NUL7 540 aaKnown RBP6.77□□□□□ -1.33
TRAF3-205ENST00000558700 NUP50Q9UKX7 468 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 B9D1Q9UPM9 204 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 INSIG2Q9Y5U4 225 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 AUP1Q9Y679 476 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 CDH10Q9Y6N8 788 aa6.77□□□□□ -1.33
TRAF3-205ENST00000558700 TMEM89A2RUT3 159 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 F5H5K5 113 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 M0R135 149 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 MLNRO43193 412 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 DCTN3O75935 186 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 GPANK1O95872 356 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 ACSM4P0C7M7 580 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 IRF2P14316 349 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 ZFP36P26651 326 aaKnown RBP6.76□□□□□ -1.33
TRAF3-205ENST00000558700 GATA4P43694 442 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 SLC6A9P48067 706 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 MTNR1BP49286 362 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 RAD23AP54725 363 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 SEC61A1P61619 476 aaKnown RBP6.76□□□□□ -1.33
TRAF3-205ENST00000558700 GNB2P62879 340 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 MXRA7P84157 204 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.76□□□□□ -1.33
TRAF3-205ENST00000558700 TRAP1Q12931 704 aaKnown RBP6.76□□□□□ -1.33
TRAF3-205ENST00000558700 TSPAN31Q12999 210 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 HNRNPA0Q13151 305 aaKnown RBP6.76□□□□□ -1.33
TRAF3-205ENST00000558700 ZNF181Q2M3W8 571 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 TREML4Q6UXN2 200 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 COLCA1Q6ZS62 124 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 DOK3Q7L591 496 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 MRPL21Q7Z2W9 205 aaKnown RBP6.76□□□□□ -1.33
TRAF3-205ENST00000558700 CPLX4Q7Z7G2 160 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 MOGAT3Q86VF5 341 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 LINC00471Q8N535 108 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 C3orf56Q8N813 242 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 PROKR2Q8NFJ6 384 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 OR8B3Q8NGG8 313 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 OR4C15Q8NGM1 316 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 OR11L1Q8NGX0 322 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 GNPDA2Q8TDQ7 276 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 C22orf15Q8WYQ4 148 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 DVL3Q92997 716 aaPredicted RBP6.76□□□□□ -1.33
TRAF3-205ENST00000558700 NEIL1Q96FI4 390 aaPredicted RBP6.76□□□□□ -1.33
TRAF3-205ENST00000558700 ZNF799Q96GE5 643 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 OR8B2Q96RD0 313 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 FN3KQ9H479 309 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 IL1RAPQ9NPH3 570 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 ESM1Q9NQ30 184 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 MMP26Q9NRE1 261 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 TMEM100Q9NV29 134 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 MIOXQ9UGB7 285 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 ZNF281Q9Y2X9 895 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 U3KQE9 123 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 ARHGAP32A7KAX9 2087 aa6.76□□□□□ -1.33
TRAF3-205ENST00000558700 TRAV40A0A0B4J280 105 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms