RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 ACOXLQ9NUZ1 547 aa14.93□□□□□ -0.02
TPM1-214ENST00000558544 BEX4Q9NWD9 120 aaPredicted RBP14.93□□□□□ -0.02
TPM1-214ENST00000558544 FAM206AQ9NX38 181 aa14.93□□□□□ -0.02
TPM1-214ENST00000558544 ZNF319Q9P2F9 582 aa14.93□□□□□ -0.02
TPM1-214ENST00000558544 GNG8Q9UK08 70 aa14.93□□□□□ -0.02
TPM1-214ENST00000558544 GTF2A1LQ9UNN4 478 aa14.93□□□□□ -0.02
TPM1-214ENST00000558544 IRGMA1A4Y4 181 aa14.92□□□□□ -0.02
TPM1-214ENST00000558544 XRCC2O43543 280 aa14.92□□□□□ -0.02
TPM1-214ENST00000558544 TIMM8AO60220 97 aaPredicted RBP14.92□□□□□ -0.02
TPM1-214ENST00000558544 SRSF10O75494 262 aaKnown RBP14.92□□□□□ -0.02
TPM1-214ENST00000558544 RAC2P15153 192 aa14.92□□□□□ -0.02
TPM1-214ENST00000558544 PPOXP50336 477 aa14.92□□□□□ -0.02
TPM1-214ENST00000558544 ZNF92Q03936 586 aa14.92□□□□□ -0.02
TPM1-214ENST00000558544 TIGD6Q17RP2 521 aa14.92□□□□□ -0.02
TPM1-214ENST00000558544 CDONQ4KMG0 1287 aa14.92□□□□□ -0.02
TPM1-214ENST00000558544 C6orf141Q5SZD1 244 aa14.92□□□□□ -0.02
TPM1-214ENST00000558544 LIPNQ5VXI9 398 aa14.92□□□□□ -0.02
TPM1-214ENST00000558544 OR2T2Q6IF00 324 aa14.92□□□□□ -0.02
TPM1-214ENST00000558544 AHSA2Q719I0 299 aa14.92□□□□□ -0.02
TPM1-214ENST00000558544 PGAP1Q75T13 922 aa14.92□□□□□ -0.02
TPM1-214ENST00000558544 MRPL21Q7Z2W9 205 aaKnown RBP14.92□□□□□ -0.02
TPM1-214ENST00000558544 ZCCHC24Q8N2G6 241 aaKnown RBP14.92□□□□□ -0.02
TPM1-214ENST00000558544 OR8B12Q8NGG6 310 aa14.92□□□□□ -0.02
TPM1-214ENST00000558544 OR52H1Q8NGJ2 320 aa14.92□□□□□ -0.02
TPM1-214ENST00000558544 GTF3AQ92664 365 aaKnown RBP14.92□□□□□ -0.02
TPM1-214ENST00000558544 MBD6Q96DN6 1003 aa14.92□□□□□ -0.02
TPM1-214ENST00000558544 PERPQ96FX8 193 aa14.92□□□□□ -0.02
TPM1-214ENST00000558544 VRK1Q99986 396 aaPredicted RBP14.92□□□□□ -0.02
TPM1-214ENST00000558544 OR10A2Q9H208 303 aa14.92□□□□□ -0.02
TPM1-214ENST00000558544 INPP5EQ9NRR6 644 aa14.92□□□□□ -0.02
TPM1-214ENST00000558544 PLCXD1Q9NUJ7 323 aa14.92□□□□□ -0.02
TPM1-214ENST00000558544 ERVK13-1Q9NX77 482 aa14.92□□□□□ -0.02
TPM1-214ENST00000558544 PURGQ9UJV8 347 aaKnown RBP14.92□□□□□ -0.02
TPM1-214ENST00000558544 R4GMQ9 66 aa14.92□□□□□ -0.02
TPM1-214ENST00000558544 TEX15Q9BXT5 2789 aa14.92□□□□□ -0.02
TPM1-214ENST00000558544 LOC110117498-PIK3R3F6TDL0 507 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 H7C417 338 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 SLC1A7O00341 560 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 SULT1C4O75897 302 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 PNPP00491 289 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 NAT2P11245 290 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 PIPP12273 146 aaPredicted RBP14.91□□□□□ -0.02
TPM1-214ENST00000558544 KITLGP21583 273 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 PTH2RP49190 550 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 OR12D2P58182 307 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 ACTA2P62736 377 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 ACTG2P63267 376 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 GALEQ14376 348 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 OR5AS1Q8N127 324 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 HAVCR1Q96D42 359 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 TMEM80Q96HE8 168 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 REEP6Q96HR9 211 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 C4orf36Q96KX1 117 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 ZNF649Q9BS31 505 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 JAM3Q9BX67 310 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 PBOV1Q9GZY1 135 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 TPK1Q9H3S4 243 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 Q9H521 79 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 PSORS1C1Q9UIG5 152 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 PCDHGB5Q9Y5G0 923 aa14.91□□□□□ -0.02
TPM1-214ENST00000558544 CCDC168Q8NDH2 2452 aa14.9□□□□□ -0.02
TPM1-214ENST00000558544 EFCAB10A6NFE3 127 aa14.9□□□□□ -0.02
TPM1-214ENST00000558544 J3QLW9 94 aa14.9□□□□□ -0.02
TPM1-214ENST00000558544 NDUFS7O75251 213 aa14.9□□□□□ -0.02
TPM1-214ENST00000558544 ZNF19P17023 458 aa14.9□□□□□ -0.02
TPM1-214ENST00000558544 DCKP27707 260 aa14.9□□□□□ -0.02
TPM1-214ENST00000558544 PSMB10P40306 273 aa14.9□□□□□ -0.02
TPM1-214ENST00000558544 MMP16P51512 607 aa14.9□□□□□ -0.02
TPM1-214ENST00000558544 MVKQ03426 396 aa14.9□□□□□ -0.02
TPM1-214ENST00000558544 ST3GAL4Q11206 333 aa14.9□□□□□ -0.02
TPM1-214ENST00000558544 MOGQ16653 247 aa14.9□□□□□ -0.02
TPM1-214ENST00000558544 ZNF540Q8NDQ6 660 aa14.9□□□□□ -0.02
TPM1-214ENST00000558544 BHLHE23Q8NDY6 225 aa14.9□□□□□ -0.02
TPM1-214ENST00000558544 PPP1R14AQ96A00 147 aa14.9□□□□□ -0.02
TPM1-214ENST00000558544 SGK3Q96BR1 496 aa14.9□□□□□ -0.02
TPM1-214ENST00000558544 TRMT61AQ96FX7 289 aaKnown RBP14.9□□□□□ -0.02
TPM1-214ENST00000558544 MRPL48Q96GC5 212 aaKnown RBP14.9□□□□□ -0.02
TPM1-214ENST00000558544 SORCS2Q96PQ0 1159 aa14.9□□□□□ -0.02
TPM1-214ENST00000558544 SIGLEC11Q96RL6 698 aa14.9□□□□□ -0.02
TPM1-214ENST00000558544 MOB1AQ9H8S9 216 aa14.9□□□□□ -0.02
TPM1-214ENST00000558544 G6PC2Q9NQR9 355 aa14.9□□□□□ -0.02
TPM1-214ENST00000558544 ZNF701Q9NV72 531 aaPredicted RBP14.9□□□□□ -0.02
TPM1-214ENST00000558544 UBAP1Q9NZ09 502 aa14.9□□□□□ -0.02
TPM1-214ENST00000558544 CNOT2Q9NZN8 540 aaKnown RBP14.9□□□□□ -0.02
TPM1-214ENST00000558544 GPR160Q9UJ42 338 aa14.9□□□□□ -0.02
TPM1-214ENST00000558544 FBXO9Q9UK97 447 aaPredicted RBP14.9□□□□□ -0.02
TPM1-214ENST00000558544 DIMT1Q9UNQ2 313 aaKnown RBP14.9□□□□□ -0.02
TPM1-214ENST00000558544 PLSCR5A0PG75 271 aa14.89□□□□□ -0.03
TPM1-214ENST00000558544 ACOD1A6NK06 481 aa14.89□□□□□ -0.03
TPM1-214ENST00000558544 LIMS3P0CW19 117 aa14.89□□□□□ -0.03
TPM1-214ENST00000558544 LIMS4P0CW20 117 aa14.89□□□□□ -0.03
TPM1-214ENST00000558544 PAX1P15863 534 aa14.89□□□□□ -0.03
TPM1-214ENST00000558544 ETV1P50549 477 aa14.89□□□□□ -0.03
TPM1-214ENST00000558544 MMP15P51511 669 aa14.89□□□□□ -0.03
TPM1-214ENST00000558544 ATP5J2P56134 94 aa14.89□□□□□ -0.03
TPM1-214ENST00000558544 MED21Q13503 144 aa14.89□□□□□ -0.03
TPM1-214ENST00000558544 BCL2L15Q5TBC7 163 aa14.89□□□□□ -0.03
TPM1-214ENST00000558544 RORBQ92753 470 aa14.89□□□□□ -0.03
TPM1-214ENST00000558544 SPSB4Q96A44 273 aa14.89□□□□□ -0.03
TPM1-214ENST00000558544 REPIN1Q9BWE0 567 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms