RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 SPATA31A1Q5TZJ5 1347 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 EFSO43281 561 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 CD1CP29017 333 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 FLT3LGP49771 235 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 IKZF1Q13422 519 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 TMEM128Q5BJH2 165 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 WDR73Q6P4I2 378 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 CSNK1G1Q9HCP0 422 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 LSM2Q9Y333 95 aaKnown RBP3.35□□□□□ -1.87
ATXN3-248ENST00000558190 UHRF1BP1LA0JNW5 1464 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 OR2A4O95047 310 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 NUDT3O95989 172 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 HAND1O96004 215 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 GLIPR1P48060 266 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 GABREP78334 506 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 RTL6Q6ICC9 239 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 CRYGNQ8WXF5 182 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 OR2A7Q96R45 310 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 ONECUT2O95948 504 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 IRS1P35568 1242 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 CEACAM6P40199 344 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 IER3P46695 156 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 LRRTM4Q86VH4 590 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 GABARAPL1Q9H0R8 117 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-248ENST00000558190 FOXJ2Q9P0K8 574 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 OPN4Q9UHM6 478 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 SRPK3Q9UPE1 567 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 SMIM6P0DI80 62 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 CD70P32970 193 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 SRPXP78539 464 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 BTG2P78543 158 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 RING1Q06587 406 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 ECH1Q13011 328 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 PPP1R1AQ13522 171 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 SDR9C7Q8NEX9 313 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 OR1L4Q8NGR5 311 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 OLIG1Q8TAK6 271 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 RNASEKQ6P5S7 137 aaKnown RBP3.34□□□□□ -1.87
ATXN3-248ENST00000558190 SLC38A9Q8NBW4 561 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 OR5D13Q8NGL4 314 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 DOK5Q9P104 306 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 SYNJ2O15056 1496 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 TEX50A0A1B0GTY4 177 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 HMGN4O00479 90 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 PPP2CAP67775 309 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 STARD4Q96DR4 205 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 MYOM2P54296 1465 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 HYAL3O43820 417 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-248ENST00000558190 SLC35E2P0CK97 266 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 HIST1H1TP22492 207 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-248ENST00000558190 PIGPP57054 158 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 ARL16Q0P5N6 197 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 PLCXD3Q63HM9 321 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 XRCC2O43543 280 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 CEACAM1P13688 526 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 BMP5P22003 454 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 ELAVL4P26378 380 aaKnown RBP3.34□□□□□ -1.87
ATXN3-248ENST00000558190 SRSF9Q13242 221 aaKnown RBP eCLIP3.34□□□□□ -1.87
ATXN3-248ENST00000558190 KLF9Q13886 244 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-248ENST00000558190 DCAF12L2Q5VW00 463 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 FLYWCH2Q96CP2 140 aaKnown RBP3.34□□□□□ -1.87
ATXN3-248ENST00000558190 LMAN1LQ9HAT1 526 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 TMED7-TICAM2A0A0A6YYA0 188 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 SH2D1BO14796 132 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 NMBP08949 121 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 WNT3P56703 355 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF266Q14584 549 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 DRAM2Q6UX65 266 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 CLEC18BQ6UXF7 455 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 DCXRQ7Z4W1 244 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 FIGNL2A6NMB9 653 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 GREM1O60565 184 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 SCGB1A1P11684 91 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 ICAM2P13598 275 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 DAP3P51398 398 aaKnown RBP3.34□□□□□ -1.87
ATXN3-248ENST00000558190 C1orf185Q5T7R7 199 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 DHRS11Q6UWP2 260 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 CMTM2Q8TAZ6 248 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 CXorf36Q9H7Y0 433 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 FBXL17Q9UF56 701 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 A0A1W2PPE2 198 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 KLF4O43474 513 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 NTN1O95631 604 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 MUC1P15941 1255 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-248ENST00000558190 FOXO1Q12778 655 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 AMMECR1LQ6DCA0 310 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 FAHD2BQ6P2I3 314 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-248ENST00000558190 D2HGDHQ8N465 521 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 FAHD2AQ96GK7 314 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 MENTQ9BUN1 341 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 DNMT3BQ9UBC3 853 aaKnown RBP3.34□□□□□ -1.87
ATXN3-248ENST00000558190 CDRT15L2A8MXV6 281 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 TRAPPC2LH3BP13 241 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 NDUFS6O75380 124 aaKnown RBP3.34□□□□□ -1.87
ATXN3-248ENST00000558190 UTS2O95399 124 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 ID4P47928 161 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 SHC2P98077 582 aa3.34□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF770Q6IQ21 691 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-248ENST00000558190 MOSPD3O75425 235 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms