RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 MRM2Q9UI43 246 aaKnown RBP21.82■■□□□ 1.08
SMAD6-202ENST00000557916 F12P00748 615 aaPredicted RBP21.81■■□□□ 1.08
SMAD6-202ENST00000557916 LIPAP38571 399 aa21.81■■□□□ 1.08
SMAD6-202ENST00000557916 ZNF85Q03923 595 aa21.81■■□□□ 1.08
SMAD6-202ENST00000557916 ZNF92Q03936 586 aa21.81■■□□□ 1.08
SMAD6-202ENST00000557916 RAB40BQ12829 278 aa21.81■■□□□ 1.08
SMAD6-202ENST00000557916 TESK1Q15569 626 aa21.81■■□□□ 1.08
SMAD6-202ENST00000557916 KLHL22Q53GT1 634 aa21.81■■□□□ 1.08
SMAD6-202ENST00000557916 SHEQ5VZ18 495 aa21.81■■□□□ 1.08
SMAD6-202ENST00000557916 MRPL21Q7Z2W9 205 aaKnown RBP21.81■■□□□ 1.08
SMAD6-202ENST00000557916 THAP5Q7Z6K1 395 aa21.81■■□□□ 1.08
SMAD6-202ENST00000557916 GTF3AQ92664 365 aaKnown RBP21.81■■□□□ 1.08
SMAD6-202ENST00000557916 OR10A2Q9H208 303 aa21.81■■□□□ 1.08
SMAD6-202ENST00000557916 CYSLTR2Q9NS75 346 aa21.81■■□□□ 1.08
SMAD6-202ENST00000557916 CGGBP1Q9UFW8 167 aaPredicted RBP21.81■■□□□ 1.08
SMAD6-202ENST00000557916 TMEM269A0A1B0GVZ9 245 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 DAPL1A0PJW8 107 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 C17orf100A8MU93 164 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 XRCC2O43543 280 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 FADS2O95864 444 aaKnown RBP21.8■■□□□ 1.08
SMAD6-202ENST00000557916 KRT8P05787 483 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 SELEP16581 610 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 VHLP40337 213 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 ZNF81P51508 661 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 PRSS12P56730 875 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 CDK5R2Q13319 367 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 ZNF829Q3KNS6 432 aaPredicted RBP21.8■■□□□ 1.08
SMAD6-202ENST00000557916 PRSS57Q6UWY2 283 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 ACBD7Q8N6N7 88 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 YIPF7Q8N8F6 280 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 SGK3Q96BR1 496 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 MRPS18AQ9NVS2 196 aaKnown RBP21.8■■□□□ 1.08
SMAD6-202ENST00000557916 ZNF319Q9P2F9 582 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 PRRC2AP48634 2157 aaKnown RBP21.8■■□□□ 1.08
SMAD6-202ENST00000557916 METTL15A6NJ78 407 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 SSX4O60224 188 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 HSPA13P48723 471 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 TIGD6Q17RP2 521 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 PLEKHG7Q6ZR37 379 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 KRTAP1-3Q8IUG1 177 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 OR5AS1Q8N127 324 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 NEU4Q8WWR8 484 aaPredicted RBP21.8■■□□□ 1.08
SMAD6-202ENST00000557916 REPIN1Q9BWE0 567 aaKnown RBP21.8■■□□□ 1.08
SMAD6-202ENST00000557916 MSL2Q9HCI7 577 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 FAM206AQ9NX38 181 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 MYRFQ9Y2G1 1151 aa21.8■■□□□ 1.08
SMAD6-202ENST00000557916 ZSCAN5BA6NJL1 495 aa21.79■■□□□ 1.08
SMAD6-202ENST00000557916 ACOD1A6NK06 481 aa21.79■■□□□ 1.08
SMAD6-202ENST00000557916 SULT1C4O75897 302 aa21.79■■□□□ 1.08
SMAD6-202ENST00000557916 LY6HO94772 140 aa21.79■■□□□ 1.08
SMAD6-202ENST00000557916 GFOD2Q3B7J2 385 aa21.79■■□□□ 1.08
SMAD6-202ENST00000557916 ZMAT1Q5H9K5 638 aa21.79■■□□□ 1.08
SMAD6-202ENST00000557916 ZNF684Q5T5D7 378 aa21.79■■□□□ 1.08
SMAD6-202ENST00000557916 OR52I1Q8NGK6 324 aa21.79■■□□□ 1.08
SMAD6-202ENST00000557916 FBLIM1Q8WUP2 373 aa21.79■■□□□ 1.08
SMAD6-202ENST00000557916 SPSB4Q96A44 273 aa21.79■■□□□ 1.08
SMAD6-202ENST00000557916 REEP6Q96HR9 211 aa21.79■■□□□ 1.08
SMAD6-202ENST00000557916 OPA3Q9H6K4 179 aa21.79■■□□□ 1.08
SMAD6-202ENST00000557916 IQCF6A8MYZ5 107 aa21.78■■□□□ 1.08
SMAD6-202ENST00000557916 MMP16P51512 607 aa21.78■■□□□ 1.08
SMAD6-202ENST00000557916 BHLHE23Q8NDY6 225 aa21.78■■□□□ 1.08
SMAD6-202ENST00000557916 OR8G5Q8NG78 346 aa21.78■■□□□ 1.08
SMAD6-202ENST00000557916 OR8B12Q8NGG6 310 aa21.78■■□□□ 1.08
SMAD6-202ENST00000557916 R4GMQ9 66 aa21.78■■□□□ 1.08
SMAD6-202ENST00000557916 GGT3PA6NGU5 568 aa21.77■■□□□ 1.08
SMAD6-202ENST00000557916 SPRY3O43610 288 aa21.77■■□□□ 1.08
SMAD6-202ENST00000557916 RPP14O95059 124 aaKnown RBP21.77■■□□□ 1.08
SMAD6-202ENST00000557916 IGHA1P01876 353 aa21.77■■□□□ 1.08
SMAD6-202ENST00000557916 PCGF3Q3KNV8 242 aa21.77■■□□□ 1.08
SMAD6-202ENST00000557916 WFDC11Q8NEX6 87 aa21.77■■□□□ 1.08
SMAD6-202ENST00000557916 SPRYD4Q8WW59 207 aaPredicted RBP21.77■■□□□ 1.08
SMAD6-202ENST00000557916 PBOV1Q9GZY1 135 aa21.77■■□□□ 1.08
SMAD6-202ENST00000557916 RGCCQ9H4X1 137 aa21.77■■□□□ 1.08
SMAD6-202ENST00000557916 GNG8Q9UK08 70 aa21.77■■□□□ 1.08
SMAD6-202ENST00000557916 ZDHHC8Q9ULC8 765 aa21.77■■□□□ 1.08
SMAD6-202ENST00000557916 CD300LBA8K4G0 201 aa21.76■■□□□ 1.07
SMAD6-202ENST00000557916 LOC110117498-PIK3R3F6TDL0 507 aa21.76■■□□□ 1.07
SMAD6-202ENST00000557916 SRSF10O75494 262 aaKnown RBP21.76■■□□□ 1.07
SMAD6-202ENST00000557916 PNPP00491 289 aa21.76■■□□□ 1.07
SMAD6-202ENST00000557916 IGHV1-46P01743 117 aa21.76■■□□□ 1.07
SMAD6-202ENST00000557916 CFL1P23528 166 aaKnown RBP21.76■■□□□ 1.07
SMAD6-202ENST00000557916 MAGEB1P43366 347 aa21.76■■□□□ 1.07
SMAD6-202ENST00000557916 MFGE8Q08431 387 aaPredicted RBP21.76■■□□□ 1.07
SMAD6-202ENST00000557916 TSTQ16762 297 aaKnown RBP21.76■■□□□ 1.07
SMAD6-202ENST00000557916 CDONQ4KMG0 1287 aa21.76■■□□□ 1.07
SMAD6-202ENST00000557916 TP53I3Q53FA7 332 aa21.76■■□□□ 1.07
SMAD6-202ENST00000557916 LIPNQ5VXI9 398 aa21.76■■□□□ 1.07
SMAD6-202ENST00000557916 LAIR2Q6ISS4 152 aa21.76■■□□□ 1.07
SMAD6-202ENST00000557916 Q6ZR03 302 aa21.76■■□□□ 1.07
SMAD6-202ENST00000557916 FAM220AQ7Z4H9 259 aa21.76■■□□□ 1.07
SMAD6-202ENST00000557916 LHFPL3Q86UP9 236 aa21.76■■□□□ 1.07
SMAD6-202ENST00000557916 SIGLEC11Q96RL6 698 aa21.76■■□□□ 1.07
SMAD6-202ENST00000557916 FGF20Q9NP95 211 aaPredicted RBP21.76■■□□□ 1.07
SMAD6-202ENST00000557916 INPP5EQ9NRR6 644 aa21.76■■□□□ 1.07
SMAD6-202ENST00000557916 NKIRAS2Q9NYR9 191 aa21.76■■□□□ 1.07
SMAD6-202ENST00000557916 GTF2A1LQ9UNN4 478 aa21.76■■□□□ 1.07
SMAD6-202ENST00000557916 IRGMA1A4Y4 181 aa21.75■■□□□ 1.07
SMAD6-202ENST00000557916 CCL8P80075 99 aa21.75■■□□□ 1.07
SMAD6-202ENST00000557916 FAM3AP98173 230 aa21.75■■□□□ 1.07
SMAD6-202ENST00000557916 CLEC12BQ2HXU8 276 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms