RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 GK2Q14410 553 aaPredicted RBP13.11□□□□□ -0.31
NEDD1-213ENST00000557644 XAF1Q6GPH4 301 aa13.11□□□□□ -0.31
NEDD1-213ENST00000557644 KCTD20Q7Z5Y7 419 aa13.11□□□□□ -0.31
NEDD1-213ENST00000557644 SYS1Q8N2H4 156 aa13.11□□□□□ -0.31
NEDD1-213ENST00000557644 KLHL36Q8N4N3 616 aa13.11□□□□□ -0.31
NEDD1-213ENST00000557644 ZNF611Q8N823 705 aa13.11□□□□□ -0.31
NEDD1-213ENST00000557644 MRPL24Q96A35 216 aaKnown RBP13.11□□□□□ -0.31
NEDD1-213ENST00000557644 SOX7Q9BT81 388 aa13.11□□□□□ -0.31
NEDD1-213ENST00000557644 BLOC1S6Q9UL45 172 aa13.11□□□□□ -0.31
NEDD1-213ENST00000557644 LAMP3Q9UQV4 416 aa13.11□□□□□ -0.31
NEDD1-213ENST00000557644 LRCH1Q9Y2L9 728 aa13.11□□□□□ -0.31
NEDD1-213ENST00000557644 CAB39Q9Y376 341 aaPredicted RBP13.11□□□□□ -0.31
NEDD1-213ENST00000557644 CACNA1DQ01668 2161 aa13.11□□□□□ -0.31
NEDD1-213ENST00000557644 TMEM129A0AVI4 362 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 J3QW42 95 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 ATE1O95260 518 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 TACSTD2P09758 323 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 DANCRP0C864 163 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 ZNF250P15622 560 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 GTF2A1P52655 376 aaPredicted RBP13.1□□□□□ -0.31
NEDD1-213ENST00000557644 CDH15P55291 814 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 NANOS3P60323 173 aaKnown RBP13.1□□□□□ -0.31
NEDD1-213ENST00000557644 PSG7Q13046 419 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 ODF4Q2M2E3 257 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 MST1LQ2TV78 715 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 ALKBH6Q3KRA9 238 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 ZNF544Q6NX49 715 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 PRSS35Q8N3Z0 413 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 ZNF485Q8NCK3 441 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 OR52H1Q8NGJ2 320 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 OR5L1Q8NGL2 311 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 SGK3Q96BR1 496 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 CMBLQ96DG6 245 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 CDCA4Q9BXL8 241 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 OR52A1Q9UKL2 312 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 LALBAP00709 142 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 CD8AP01732 235 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 ZNF718Q3SXZ3 478 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 WDR38Q5JTN6 314 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 TMPRSS11AQ6ZMR5 421 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 SYNPRQ8TBG9 265 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 MRPL48Q96GC5 212 aaKnown RBP13.1□□□□□ -0.31
NEDD1-213ENST00000557644 LYZL4Q96KX0 146 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 PLK3Q9H4B4 646 aa13.1□□□□□ -0.31
NEDD1-213ENST00000557644 RAI1Q7Z5J4 1906 aaPredicted RBP13.1□□□□□ -0.31
NEDD1-213ENST00000557644 TTRP02766 147 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 MT-ND5P03915 603 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 GCH1P30793 250 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 MALLQ13021 153 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 TIGD6Q17RP2 521 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 MBNL2Q5VZF2 373 aaKnown RBP13.09□□□□□ -0.31
NEDD1-213ENST00000557644 PRSS48Q7RTY5 328 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 CATSPERDQ86XM0 798 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 KLBQ86Z14 1044 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 FBXL14Q8N1E6 418 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 NANOGP1Q8N7R0 232 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 REEP6Q96HR9 211 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 COG8Q96MW5 612 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 OR10A2Q9H208 303 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 FRRS1LQ9P0K9 344 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 NUFIP1Q9UHK0 495 aaKnown RBP13.09□□□□□ -0.31
NEDD1-213ENST00000557644 ERGIC3Q9Y282 383 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 SNX5Q9Y5X3 404 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 H3BSH0 61 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 MYL12BO14950 172 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 KIR3DL2P43630 455 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 MAP2K4P45985 399 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 IRF3Q14653 427 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 BCL2L15Q5TBC7 163 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 OR2T2Q6IF00 324 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 FBXW12Q6X9E4 464 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 OR2G2Q8NGZ5 317 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 OR52N1Q8NH53 320 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 OR51E1Q8TCB6 317 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 OR5M11Q96RB7 305 aa13.09□□□□□ -0.31
NEDD1-213ENST00000557644 SETXQ7Z333 2677 aaKnown RBP13.09□□□□□ -0.31
NEDD1-213ENST00000557644 IGLV3-9A0A075B6K5 115 aa13.08□□□□□ -0.32
NEDD1-213ENST00000557644 KLF3P57682 345 aaPredicted RBP13.08□□□□□ -0.32
NEDD1-213ENST00000557644 GABARAPL2P60520 117 aa13.08□□□□□ -0.32
NEDD1-213ENST00000557644 RNLSQ5VYX0 342 aa13.08□□□□□ -0.32
NEDD1-213ENST00000557644 PGAP1Q75T13 922 aa13.08□□□□□ -0.32
NEDD1-213ENST00000557644 C1orf174Q8IYL3 243 aa13.08□□□□□ -0.32
NEDD1-213ENST00000557644 ELMOD2Q8IZ81 293 aa13.08□□□□□ -0.32
NEDD1-213ENST00000557644 RDH10Q8IZV5 341 aa13.08□□□□□ -0.32
NEDD1-213ENST00000557644 BHLHE23Q8NDY6 225 aa13.08□□□□□ -0.32
NEDD1-213ENST00000557644 REPIN1Q9BWE0 567 aaKnown RBP13.08□□□□□ -0.32
NEDD1-213ENST00000557644 YTHDF1Q9BYJ9 559 aaKnown RBP13.08□□□□□ -0.32
NEDD1-213ENST00000557644 SP140LQ9H930 580 aa13.08□□□□□ -0.32
NEDD1-213ENST00000557644 FAIMQ9NVQ4 179 aa13.08□□□□□ -0.32
NEDD1-213ENST00000557644 BABAM2Q9NXR7 383 aa13.08□□□□□ -0.32
NEDD1-213ENST00000557644 SIRT4Q9Y6E7 314 aaPredicted RBP13.08□□□□□ -0.32
NEDD1-213ENST00000557644 XRCC2O43543 280 aa13.08□□□□□ -0.32
NEDD1-213ENST00000557644 LILRA1O75019 489 aa13.08□□□□□ -0.32
NEDD1-213ENST00000557644 ALDH3B1P43353 468 aa13.08□□□□□ -0.32
NEDD1-213ENST00000557644 CHN2P52757 468 aa13.08□□□□□ -0.32
NEDD1-213ENST00000557644 GBX2P52951 348 aaPredicted RBP13.08□□□□□ -0.32
NEDD1-213ENST00000557644 SWI5Q1ZZU3 235 aa13.08□□□□□ -0.32
NEDD1-213ENST00000557644 MRPL21Q7Z2W9 205 aaKnown RBP13.08□□□□□ -0.32
NEDD1-213ENST00000557644 OR5AS1Q8N127 324 aa13.08□□□□□ -0.32
NEDD1-213ENST00000557644 ZCCHC24Q8N2G6 241 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms