RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 MOB4Q9Y3A3 225 aa3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 MYO5AQ9Y4I1 1855 aaKnown RBP3.74□□□□□ -1.81
MTHFD1-216ENST00000557539 PLXNA2O75051 1894 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 IGHV1OR21-1A0A087WYE8 117 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 A0A0G2JRQ6 117 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 LOC100506127A0A0U1RQW1 187 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 C12orf71A8MTZ7 269 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 H7C423 109 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 SIVA1O15304 175 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 RNF113AO15541 343 aaKnown RBP3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 FCN3O75636 299 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 SCELO95171 688 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 FGFR1OPO95684 399 aaKnown RBP3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 IGHV2-5P01817 119 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 FOXN2P32314 431 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 CRISP1P54107 249 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 ACTG1P63261 375 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 BCL2L1Q07817 233 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 STK38Q15208 465 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 RBMY1FQ15415 496 aaKnown RBP3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 Q3ZCU0 254 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 KLHL22Q53GT1 634 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 KLF17Q5JT82 389 aaPredicted RBP3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 METTL11BQ5VVY1 283 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 MLIPQ5VWP3 458 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 TIGD3Q6B0B8 471 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 C1orf94Q6P1W5 598 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 CERS6Q6ZMG9 384 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 STXBP4Q6ZWJ1 553 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 FRA10AC1Q70Z53 315 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 C17orf82Q86X59 251 aaPredicted RBP3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 CADM2Q8N3J6 435 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 TRIML2Q8N7C3 387 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 TTC29Q8NA56 475 aaPredicted RBP3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 TMEM104Q8NE00 496 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 LYPD6BQ8NI32 183 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 PSMB7Q99436 277 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 SH3GL1Q99961 368 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 KRTAP2-2Q9BYT5 123 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 UCK2Q9BZX2 261 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 GBA3Q9H227 469 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 CHMP4BQ9H444 224 aaKnown RBP3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 GNB4Q9HAV0 340 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 LY9Q9HBG7 655 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 RETNQ9HD89 108 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 TREM2Q9NZC2 230 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 KCNIP1Q9NZI2 227 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 V9GY05 133 aa3.73□□□□□ -1.81
MTHFD1-216ENST00000557539 MDC1Q14676 2089 aaKnown RBP3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 MYH7P12883 1935 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 ARID1AO14497 2285 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 A0A087WYN8 130 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 A0A1B0GU03 582 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 A6NIZ1 184 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 ZNF879B4DU55 563 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 E9PQ18 207 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 K7N7A8 449 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 POLR3GO15318 223 aaPredicted RBP3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 CD5LO43866 347 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 EIF4E2O60573 245 aaKnown RBP3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 CLPXO76031 633 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 IFNW1P05000 195 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 CLTAP09496 248 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 MGMTP16455 207 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 TBPP20226 339 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 FASP25445 335 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 AQP1P29972 269 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 NTSP30990 170 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 LONP1P36776 959 aaKnown RBP3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 CA7P43166 264 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 RAP1BP61224 184 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 RUSC1-AS1Q66K80 236 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 SLC25A25Q6KCM7 469 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 ANKRD26P1Q6NSI1 321 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 ZNF343Q6P1L6 599 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 TTC23LQ6PF05 361 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 C2orf66Q6UXQ4 117 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 ZNF546Q86UE3 836 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 RDH10Q8IZV5 341 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 PUSL1Q8N0Z8 303 aaKnown RBP3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 JAGN1Q8N5M9 183 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 C8orf31Q8N9H6 132 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 ASCC1Q8N9N2 400 aaKnown RBP3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 LRRC75AQ8NAA5 344 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 MAPK1IP1LQ8NDC0 245 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 OR4A15Q8NGL6 344 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 ZNF502Q8TBZ5 544 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 ZNF596Q8TC21 504 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 LKAAEAR1Q8TD35 194 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 CD300LFQ8TDQ1 290 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 CXorf40AQ8TE69 158 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 CHCHD10Q8WYQ3 142 aaPredicted RBP3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 FRAT1Q92837 279 aaPredicted RBP3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 ECHDC3Q96DC8 303 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 JSRP1Q96MG2 331 aaPredicted RBP3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 NUDT9Q9BW91 350 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 ACTR3CQ9C0K3 210 aaPredicted RBP3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 SLC7A5P2Q9GIP4 190 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 ISG20L2Q9H9L3 353 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms