RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 BTG1P62324 171 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 TNFAIP6P98066 277 aaPredicted RBP4.89□□□□□ -1.63
VPS33B-207ENST00000557470 PAX2Q02962 417 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 HSF2Q03933 536 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 RGNQ15493 299 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 OR1Q1Q15612 314 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 DEFB112Q30KQ8 113 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 TMEM155Q4W5P6 130 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 FBLN7Q53RD9 439 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 ESCO2Q56NI9 601 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 PABPC1L2AQ5JQF8 200 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 C6orf10Q5SRN2 563 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 BEND6Q5SZJ8 279 aaPredicted RBP4.89□□□□□ -1.63
VPS33B-207ENST00000557470 LCE1DQ5T752 114 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 DHRS4L2Q6PKH6 230 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 BRD3OSQ6XYD6 125 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 RFPL4BQ6ZWI9 263 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 LRRC28Q86X40 367 aaPredicted RBP4.89□□□□□ -1.63
VPS33B-207ENST00000557470 LRRC18Q8N456 261 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 ZNF283Q8N7M2 679 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 SLC25A40Q8TBP6 338 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 KLF14Q8TD94 323 aaPredicted RBP4.89□□□□□ -1.63
VPS33B-207ENST00000557470 MCHR2Q969V1 340 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 UPRTQ96BW1 309 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 RNFT2Q96EX2 444 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 SLC25A44Q96H78 314 aaPredicted RBP4.89□□□□□ -1.63
VPS33B-207ENST00000557470 POM121L2Q96KW2 1035 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 SIGLEC11Q96RL6 698 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 ZNF347Q96SE7 839 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 ARHGDIGQ99819 225 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 TMEM43Q9BTV4 400 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 CHIAQ9BZP6 476 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 MARCH7Q9H992 704 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 VIPAS39Q9H9C1 493 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 CYSLTR2Q9NS75 346 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 FKBP14Q9NWM8 211 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 TAS2R5Q9NYW4 299 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 C1RLQ9NZP8 487 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 SLAMF8Q9P0V8 285 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 IL20RAQ9UHF4 553 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 HAO1Q9UJM8 370 aa4.89□□□□□ -1.63
VPS33B-207ENST00000557470 IGHV2-70DA0A0C4DH43 119 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 CLPSL1A2RUU4 121 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 HTR3EA5X5Y0 456 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 CEACAM18A8MTB9 384 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 LDLRAD4O15165 306 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 RNF13O43567 381 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 IDH3BO43837 385 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 SHOX2O60902 331 aaPredicted RBP4.88□□□□□ -1.63
VPS33B-207ENST00000557470 PFDN1O60925 122 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 OR6A2O95222 327 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 CH25HO95992 272 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 IGHG1P01857 330 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 CRYBA1P05813 215 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 RAP2AP10114 183 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 THRBP10828 461 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 SELEP16581 610 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 ZNF32P17041 273 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 HOXB9P17482 250 aaPredicted RBP4.88□□□□□ -1.63
VPS33B-207ENST00000557470 BGNP21810 368 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 CDAP32320 146 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 LIPAP38571 399 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 MDH2P40926 338 aaKnown RBP4.88□□□□□ -1.63
VPS33B-207ENST00000557470 ZNF84P51523 738 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 RGS8P57771 180 aaPredicted RBP4.88□□□□□ -1.63
VPS33B-207ENST00000557470 CLRN1P58418 232 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 PPP1CBP62140 327 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 EFNB1P98172 346 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 CD83Q01151 205 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 FADDQ13158 208 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 RIPK1Q13546 671 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 ZNF273Q14593 569 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 ZNF74Q16587 644 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 HIST3H3Q16695 136 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 NDUFA5Q16718 116 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 SMUG1Q53HV7 270 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 IGSF11Q5DX21 431 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 ZMAT1Q5H9K5 638 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 MTX3Q5HYI7 312 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 ZNF774Q6NX45 483 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 BTNL3Q6UXE8 466 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 LRRN1Q6UXK5 716 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 C10orf111Q8N326 155 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 MREGQ8N565 214 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 NOXO1Q8NFA2 376 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 OR10S1Q8NGN2 331 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 OR9I1Q8NGQ6 314 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 AKR7LQ8NHP1 331 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 FAM110DQ8TAY7 271 aaPredicted RBP4.88□□□□□ -1.63
VPS33B-207ENST00000557470 ABHD4Q8TB40 342 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 DACT3Q96B18 629 aaPredicted RBP4.88□□□□□ -1.63
VPS33B-207ENST00000557470 ITCHQ96J02 903 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 SEPHS2Q99611 448 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 UQCC2Q9BRT2 126 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 SSBP3Q9BWW4 388 aaPredicted RBP4.88□□□□□ -1.63
VPS33B-207ENST00000557470 MRPL13Q9BYD1 178 aaKnown RBP4.88□□□□□ -1.63
VPS33B-207ENST00000557470 FAM192AQ9GZU8 254 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 NSRP1Q9H0G5 558 aaKnown RBP4.88□□□□□ -1.63
VPS33B-207ENST00000557470 VCXQ9H320 206 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 WDR55Q9H6Y2 383 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms