RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 KMT2CQ8NEZ4 4911 aaKnown RBP10.8□□□□□ -0.68
SHMT2-230ENST00000557427 J3QLW9 94 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 M0R1B8 84 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 CTDSP2O14595 271 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 ABCD4O14678 606 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 FZD7O75084 574 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 CLEC2LP0C7M8 214 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 ZNF19P17023 458 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 ZNF43P17038 809 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 TNFSF8P32971 234 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 SRP14P37108 136 aaKnown RBP10.8□□□□□ -0.68
SHMT2-230ENST00000557427 MTNR1BP49286 362 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 CENPAP49450 140 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 EFNA4P52798 201 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 GBX2P52951 348 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-230ENST00000557427 CLDN17P56750 224 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 OR12D2P58182 307 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 MXD1Q05195 221 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 ZP4Q12836 540 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 CCDC58Q4VC31 144 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 OR7E24Q6IFN5 339 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 H1FNTQ75WM6 255 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-230ENST00000557427 SSX6Q7RTT6 188 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 SLC16A9Q7RTY1 509 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 PIAS4Q8N2W9 510 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-230ENST00000557427 MS4A15Q8N5U1 240 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 SCAIQ8N9R8 606 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 WDR31Q8NA23 367 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 SYT14Q8NB59 555 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 OR6K6Q8NGW6 343 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 ZNF417Q8TAU3 575 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 HAVCR2Q8TDQ0 301 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 ZNRF4Q8WWF5 429 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 OXGR1Q96P68 337 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 ZNF587Q96SQ5 575 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-230ENST00000557427 SLC30A2Q9BRI3 323 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 CCDC32Q9BV29 185 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 MARCH7Q9H992 704 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 RPRD1BQ9NQG5 326 aaKnown RBP10.8□□□□□ -0.68
SHMT2-230ENST00000557427 MALT1Q9UDY8 824 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 ZNF346Q9UL40 294 aaKnown RBP10.8□□□□□ -0.68
SHMT2-230ENST00000557427 CMAHPQ9Y471 501 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 SLC25A15Q9Y619 301 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 CMYA5Q8N3K9 4069 aa10.8□□□□□ -0.68
SHMT2-230ENST00000557427 A0A0A6YYJ9 748 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 NPIPB13A6NJU9 1138 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 FAM157AC9JC47 383 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 NPIPB4C9JG80 1138 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 E9PI62 339 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 MS4A18H0YCH9 400 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 PLPP3O14495 311 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 SELENOFO60613 162 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 UPK3AO75631 287 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 SC5DO75845 299 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 OR6A2O95222 327 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 SERPINA3P01011 423 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 CSF3P09919 207 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 OCM2P0CE71 109 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 OCMP0CE72 109 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-230ENST00000557427 MPGP29372 298 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 PYCR1P32322 319 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 NAA10P41227 235 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-230ENST00000557427 TGM4P49221 684 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 RPL27P61353 136 aaKnown RBP10.79□□□□□ -0.68
SHMT2-230ENST00000557427 TGFBR3Q03167 851 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 DBPQ10586 325 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-230ENST00000557427 MRPL28Q13084 256 aaKnown RBP10.79□□□□□ -0.68
SHMT2-230ENST00000557427 OXA1LQ15070 435 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 CDK5R1Q15078 307 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 MS4A18Q3C1V0 323 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 TP53I3Q53FA7 332 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 HIKESHIQ53FT3 197 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 RPL22L1Q6P5R6 122 aaKnown RBP10.79□□□□□ -0.68
SHMT2-230ENST00000557427 ARL9Q6T311 187 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 MUC15Q8N387 334 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 OR51L1Q8NGJ5 315 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 ZNF519Q8TB69 540 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 RPS4Y2Q8TD47 263 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 PPP1R14BQ96C90 147 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 PELI1Q96FA3 418 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 PGLYRP3Q96LB9 341 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 FOXN4Q96NZ1 517 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 DCLRE1CQ96SD1 692 aaKnown RBP10.79□□□□□ -0.68
SHMT2-230ENST00000557427 TXNIPQ9H3M7 391 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 TPK1Q9H3S4 243 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 RERGLQ9H628 205 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 DAPK2Q9UIK4 370 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 FKBP7Q9Y680 259 aa10.79□□□□□ -0.68
SHMT2-230ENST00000557427 A0A096LPE4 126 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 A0A1W2PPZ6 126 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 ZNF587BE7ETH6 402 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 XKRYO14609 159 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 SERPINI2O75830 405 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 BLVRAP53004 296 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 HCCSP53701 268 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 PPP3R1P63098 170 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 SPOCK1Q08629 439 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 TRIM16LQ309B1 348 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 ZNF684Q5T5D7 378 aa10.78□□□□□ -0.68
SHMT2-230ENST00000557427 CARD17Q5XLA6 110 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms