RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 DUSP13Q9UII6 198 aa10.99□□□□□ -0.65
SHMT2-227ENST00000557269 OR52A1Q9UKL2 312 aa10.99□□□□□ -0.65
SHMT2-227ENST00000557269 GTF2A1LQ9UNN4 478 aa10.99□□□□□ -0.65
SHMT2-227ENST00000557269 CAB39Q9Y376 341 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-227ENST00000557269 CMAHPQ9Y471 501 aa10.99□□□□□ -0.65
SHMT2-227ENST00000557269 SIRT4Q9Y6E7 314 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-227ENST00000557269 ROS1P08922 2347 aa10.99□□□□□ -0.65
SHMT2-227ENST00000557269 IGLV3-9A0A075B6K5 115 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 LOC110117498-PIK3R3F6TDL0 507 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 J3QW42 95 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 RGS10O43665 173 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 LILRA1O75019 489 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 APOC1P02654 83 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 TTRP02766 147 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 MAP2K4P45985 399 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 SWI5Q1ZZU3 235 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 GFOD2Q3B7J2 385 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 ZNF829Q3KNS6 432 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-227ENST00000557269 ZNF718Q3SXZ3 478 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 RNLSQ5VYX0 342 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 FBXW12Q6X9E4 464 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 FAM220AQ7Z4H9 259 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 KLBQ86Z14 1044 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 MUC15Q8N387 334 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 KLHL36Q8N4N3 616 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 NANOGP1Q8N7R0 232 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 OR5L1Q8NGL2 311 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 SYNPRQ8TBG9 265 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 IGFBPL1Q8WX77 278 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 GTF3AQ92664 365 aaKnown RBP10.98□□□□□ -0.65
SHMT2-227ENST00000557269 SPSB4Q96A44 273 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 HAVCR1Q96D42 359 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 OR10A2Q9H208 303 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 FRRS1LQ9P0K9 344 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 NUFIP1Q9UHK0 495 aaKnown RBP10.98□□□□□ -0.65
SHMT2-227ENST00000557269 LAMP3Q9UQV4 416 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 SNX5Q9Y5X3 404 aa10.98□□□□□ -0.65
SHMT2-227ENST00000557269 NBPF19A0A087WUL8 3843 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 ACOD1A6NK06 481 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 ATE1O95260 518 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 IGLV3-1P01715 115 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 MT-ND5P03915 603 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 TACSTD2P09758 323 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 EEF1B2P24534 225 aaKnown RBP10.97□□□□□ -0.65
SHMT2-227ENST00000557269 RPS23P62266 143 aaKnown RBP10.97□□□□□ -0.65
SHMT2-227ENST00000557269 TNK1Q13470 666 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 EFNB3Q15768 340 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 ODF4Q2M2E3 257 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 BCL2L15Q5TBC7 163 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 OR2T2Q6IF00 324 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 C11orf71Q6IPW1 123 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 FDX2Q6P4F2 183 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 UNQ6126/PRO20091Q6UXV3 157 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 TMPRSS11AQ6ZMR5 421 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 PRSS48Q7RTY5 328 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 DTX2Q86UW9 622 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 ELMOD2Q8IZ81 293 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 RDH10Q8IZV5 341 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 FBXL14Q8N1E6 418 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 OR52H1Q8NGJ2 320 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 OR2G2Q8NGZ5 317 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 OR52N1Q8NH53 320 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 OR51E1Q8TCB6 317 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 REEP6Q96HR9 211 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 OR5M11Q96RB7 305 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 TRAF4Q9BUZ4 470 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-227ENST00000557269 REPIN1Q9BWE0 567 aaKnown RBP10.97□□□□□ -0.65
SHMT2-227ENST00000557269 YTHDF1Q9BYJ9 559 aaKnown RBP10.97□□□□□ -0.65
SHMT2-227ENST00000557269 CCDC90BQ9GZT6 254 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 PLK3Q9H4B4 646 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 CBLN4Q9NTU7 201 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 CHCHD3Q9NX63 227 aaKnown RBP10.97□□□□□ -0.65
SHMT2-227ENST00000557269 BABAM2Q9NXR7 383 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 ST6GALNAC2Q9UJ37 374 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 LRCH1Q9Y2L9 728 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 LSM2Q9Y333 95 aaKnown RBP10.97□□□□□ -0.65
SHMT2-227ENST00000557269 LRBAP50851 2863 aa10.97□□□□□ -0.65
SHMT2-227ENST00000557269 PLCE1Q9P212 2302 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 A0A1B0GTI1 187 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 TRIM64A6NGJ6 449 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 H3BSH0 61 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 P2RY10O00398 339 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 IGHV3-13P01766 116 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 RAC2P15153 192 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 CD53P19397 219 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 TUBG1P23258 451 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 GCH1P30793 250 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 ALDH3B1P43353 468 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 CHN2P52757 468 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 KLF3P57682 345 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-227ENST00000557269 GABARAPL2P60520 117 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 FAM3AP98173 230 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 MALLQ13021 153 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 TIGD6Q17RP2 521 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 AGAP6Q5VW22 663 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 PGAP1Q75T13 922 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 MRPL21Q7Z2W9 205 aaKnown RBP10.96□□□□□ -0.65
SHMT2-227ENST00000557269 EGFL6Q8IUX8 553 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 C1orf174Q8IYL3 243 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 OR5AS1Q8N127 324 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms