RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 VASH2Q86V25 355 aa13.63□□□□□ -0.23
TMEM55B-207ENST00000557041 TMEM17Q86X19 198 aa13.63□□□□□ -0.23
TMEM55B-207ENST00000557041 SEH1LQ96EE3 360 aa13.63□□□□□ -0.23
TMEM55B-207ENST00000557041 A0A1W2PPC1 479 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 LGALS8O00214 317 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 TO15178 435 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 PLPPR5Q32ZL2 321 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 THEM4Q5T1C6 240 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 C5orf46Q6UWT4 87 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 TTC9Q92623 222 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 ZNF275Q9NSD4 429 aaPredicted RBP13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 GLTPQ9NZD2 209 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 DENND4AQ7Z401 1863 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 CXCL13O43927 109 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 TTRP02766 147 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 HOXB5P09067 269 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 ITGA3P26006 1051 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 INO80EQ8NBZ0 244 aaPredicted RBP13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 AKR7LQ8NHP1 331 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 MARCH1Q8TCQ1 289 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 C12orf10Q9HB07 376 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 PADI1Q9ULC6 663 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 KANTRA0A1W2PQU2 76 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 OR2M5A3KFT3 312 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 ZNF84P51523 738 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 FXYD4P59646 89 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 DEFA5Q01523 94 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 HDDC2Q7Z4H3 204 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 GPR137CQ8N3F9 429 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 TMEM104Q8NE00 496 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 THAP6Q8TBB0 222 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 SAP25Q8TEE9 199 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 ST8SIA4Q92187 359 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 GPR173Q9NS66 373 aa13.62□□□□□ -0.23
TMEM55B-207ENST00000557041 TRBV5-7A0A0A0MS05 114 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 IGHV3-64DA0A0J9YX35 117 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 K7ESF4 209 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 SLC33A1O00400 549 aaPredicted RBP13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 B4GALT1P15291 398 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 CAPZA1P52907 286 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 SHBQ15464 509 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 WIPI1Q5MNZ9 446 aaPredicted RBP13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 TMPPEQ6ZT21 453 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 NOXO1Q8NFA2 376 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 OR8B12Q8NGG6 310 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 NUBPLQ8TB37 319 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 URM1Q9BTM9 101 aaKnown RBP13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 PCED1AQ9H1Q7 454 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 PIGLQ9Y2B2 252 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 SOCS1O15524 211 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 LDOC1O95751 146 aaPredicted RBP13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 CRYZL1O95825 349 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 TPOP07202 933 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 ERCC1P07992 297 aaPredicted RBP13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 IFI6P09912 130 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 SEC61A1P61619 476 aaKnown RBP13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 SLC35A1P78382 337 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 ESCO2Q56NI9 601 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 C20orf196Q8IYI0 205 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 LIPHQ8WWY8 451 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 KCNK17Q96T54 332 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 PRMT8Q9NR22 394 aaPredicted RBP13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 RAB22AQ9UL26 194 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 WDFY3Q8IZQ1 3526 aa13.61□□□□□ -0.23
TMEM55B-207ENST00000557041 TEX13DA0A0J9YY54 714 aaPredicted RBP13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 CTDSPLO15194 276 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 NPIPB7O75200 414 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 MPC2O95563 127 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 APOC3P02656 99 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 S100A11P31949 105 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 NUP62P37198 522 aaPredicted RBP13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 DUSP3P51452 185 aaPredicted RBP13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 ARPC4P59998 168 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 RADILQ96JH8 1075 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 GSX2Q9BZM3 304 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 FTCDNL1E5RQL4 147 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 H3BMH7 237 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 HSPB6O14558 160 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 ATF4P18848 351 aaPredicted RBP13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 MTCP1P56278 107 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 PLGLB1Q02325 96 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 CHRFAM7AQ494W8 412 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 OR5H2Q8NGV7 314 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 OXGR1Q96P68 337 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 PLEKHJ1Q9NW61 149 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 A0A096LPE4 126 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 A0A1W2PPZ6 126 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 FAM166BA8MTA8 275 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 TGM6O95932 706 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 PDGFAP04085 211 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 MSX1P28360 303 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 OPRM1P35372 400 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 AKR1C2P52895 323 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 H2BFSP57053 126 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 CARD18P57730 90 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 AKR1C1Q04828 323 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 TOR2AQ5JU69 321 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 BHLHE23Q8NDY6 225 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 OR2M3Q8NG83 312 aa13.6□□□□□ -0.23
TMEM55B-207ENST00000557041 EHFQ9NZC4 300 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms