RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 ST6GALNAC5Q9BVH7 336 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 SLC22A4Q9H015 551 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 VNN3Q9NY84 501 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 CALML5Q9NZT1 146 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 H2AFY2Q9P0M6 372 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-245ENST00000556958 A0A1B0GWJ7 208 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 hCG_1809904A0A1W2PP81 198 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 A0A1W2PPE2 198 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 A0A1W2PR64 198 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 A0A1W2PRV1 198 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 PSMB11A5LHX3 300 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 C12orf71A8MTZ7 269 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 IQCF6A8MYZ5 107 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 HMGN4O00479 90 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 MLNRO43193 412 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 RNF13O43567 381 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 BGLAPP02818 100 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 HLA-DPB1P04440 258 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 HIST1H2ABP04908 130 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 LPLP06858 475 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 CST2P09228 141 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 CDAP32320 146 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 GGT2P36268 569 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 MAGEA12P43365 314 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 DYNLT3P51808 116 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 RAD23AP54725 363 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 LINC00310P59036 64 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 MPPED2Q15777 294 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 PGS1Q32NB8 556 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 GALNTL6Q49A17 601 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 PLA1AQ53H76 456 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 CFAP157Q5JU67 520 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 BEND6Q5SZJ8 279 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-245ENST00000556958 C10orf128Q5T292 105 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 RNF220Q5VTB9 566 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 TEX36Q5VZQ5 186 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 C1orf94Q6P1W5 598 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 ULK3Q6PHR2 472 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 RNF165Q6ZSG1 346 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 FRMD7Q6ZUT3 714 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 FKBP9P1Q75LS8 142 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 HIST3H2AQ7L7L0 130 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 C16orf82Q7Z2V1 217 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 ZNF429Q86V71 674 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 FAM90A1Q86YD7 464 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 SLC30A8Q8IWU4 369 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 CLEC4FQ8N1N0 589 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 C10orf111Q8N326 155 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 COMMD1Q8N668 190 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 ANKFN1Q8N957 763 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 KLHL30-AS1Q8NEE0 82 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 OR4A15Q8NGL6 344 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 OR9Q1Q8NGQ5 310 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 OR8U1Q8NH10 309 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 MZB1Q8WU39 189 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 HIST1H2ACQ93077 130 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 TEX37Q96LM6 180 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 CCL13Q99616 98 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 HCAR1Q9BXC0 346 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 DPH5Q9H2P9 285 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 ZCCHC4Q9H5U6 513 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 IFT22Q9H7X7 185 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 SMURF2Q9HAU4 748 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 STX18Q9P2W9 335 aaKnown RBP4.54□□□□□ -1.68
ATXN3-245ENST00000556958 MARCOQ9UEW3 520 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-245ENST00000556958 GLS2Q9UI32 602 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 SNX24Q9Y343 169 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 IFT52Q9Y366 437 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 DNAH10Q8IVF4 4471 aa4.54□□□□□ -1.68
ATXN3-245ENST00000556958 IGKV1D-42A0A075B6H8 117 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 A0A1W2PPH5 198 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 A0A1W2PRG6 482 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 FAM90A8PA6NJQ4 464 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 A8MZ25 164 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 MCIDASD6RGH6 385 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 GMDSO60547 372 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 FCN3O75636 299 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 RHBDL1O75783 438 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 LINC00032P0C843 101 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 ETS2P15036 469 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 PAX6P26367 422 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 SERPINB9P50453 376 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 ERFP50548 548 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 ZNF133P52736 654 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-245ENST00000556958 OR12D2P58182 307 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 MZT1Q08AG7 82 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 MELKQ14680 651 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 ALG10BQ5I7T1 473 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 ANXA8L1Q5VT79 327 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 HHATQ5VTY9 493 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 PRAMEF6Q5VXH4 476 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 FAM91A1Q658Y4 838 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 HCP5Q6MZN7 132 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 TEPPQ6URK8 271 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 C10orf99Q6UWK7 81 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 ZNF572Q7Z3I7 529 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-245ENST00000556958 DHDDSQ86SQ9 333 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 SERPINA11Q86U17 422 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 LCA5Q86VQ0 697 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 LRRC34Q8IZ02 419 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms