RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 KCNMB1Q16558 191 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 KRTAP27-1Q3LI81 207 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 HIST2H3PS2Q5TEC6 136 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 ERICH5Q6P6B1 374 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 ZNF730Q6ZMV8 503 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 ZNF826PQ6ZT77 177 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 PTCHD4Q6ZW05 846 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 TMPRSS11FQ6ZWK6 438 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 HIST2H3AQ71DI3 136 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 PGAP1Q75T13 922 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 NAA40Q86UY6 237 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 FAM90A1Q86YD7 464 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 RNF113BQ8IZP6 322 aaKnown RBP7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 OFCC1Q8IZS5 231 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 FGFRL1Q8N441 504 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 GALNT4Q8N4A0 578 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 OR8J3Q8NGG0 315 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 ACOT11Q8WXI4 607 aaPredicted RBP7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 ST8SIA4Q92187 359 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 DMRTB1Q96MA1 342 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 ZNF583Q96ND8 569 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 TSSK2Q96PF2 358 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 SH3GL1Q99961 368 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 PPA2Q9H2U2 334 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 TOR3AQ9H497 397 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 CNTD2Q9H8S5 307 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 TMBIM4Q9HC24 238 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 SIRT7Q9NRC8 400 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 C1orf123Q9NWV4 160 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 VSX1Q9NZR4 365 aaPredicted RBP7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 ONECUT1Q9UBC0 465 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 DNAJB11Q9UBS4 358 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 FBLN5Q9UBX5 448 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 RPUSD1Q9UJJ7 312 aaKnown RBP7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 SIGLEC9Q9Y336 463 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 CAB39Q9Y376 341 aaPredicted RBP7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 KPTNQ9Y664 436 aa7.42□□□□□ -1.22
HNRNPC-227ENST00000556897 IGHV3OR15-7A0A075B7D8 119 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 A0A1B0GW55 424 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 A0A1W2PRD5 423 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 A0A1W2PRF3 423 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 A0A1W2PRM7 423 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 A6NJY4 79 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 A6NLC8 198 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 CD300LBA8K4G0 201 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 DCTN6O00399 190 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 PTBP3O95758 552 aaKnown RBP7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 ECDO95905 644 aaPredicted RBP7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 PAHP00439 452 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 LCATP04180 440 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 DUX4L2P0CJ85 424 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 DUX4L3P0CJ86 424 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 DUX4L4P0CJ87 422 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 DUX4L5P0CJ88 424 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 DUX4L6P0CJ89 424 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 DUX4L7P0CJ90 424 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 SDHAP31040 664 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 KDELR2P33947 212 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 MALLQ13021 153 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 GPR139Q6DWJ6 353 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 DUX4L9Q6RFH8 374 aaPredicted RBP7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 CFAP77Q6ZQR2 320 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 MBOAT2Q6ZWT7 520 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 MRPL21Q7Z2W9 205 aaKnown RBP7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 VTCN1Q7Z7D3 282 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 LINC00346Q8IVM7 164 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 GCSAMQ8N6F7 178 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 PPP1R35Q8TAP8 253 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 LZICQ8WZA0 190 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 PITX2Q99697 317 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 ATF6BQ99941 703 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 ADAT1Q9BUB4 502 aaKnown RBP7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 NDEL1Q9GZM8 345 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 SLC22A4Q9H015 551 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 NRIP3Q9NQ35 241 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 TRIM36Q9NQ86 728 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 FAM53CQ9NYF3 392 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 DUX4Q9UBX2 424 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 FOXJ3Q9UPW0 622 aa7.41□□□□□ -1.22
HNRNPC-227ENST00000556897 hCG_1807616A0A1W2PRN6 198 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 RNASEK-C17orf49H0YIS7 233 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 NPFFO15130 113 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 GMDSO60547 372 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 PTP4A3O75365 173 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 NDUFB2O95178 105 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 PPP1R3DO95685 299 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 IFNW1P05000 195 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 GRPP07492 148 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 EEF1B2P24534 225 aaKnown RBP7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 GGT2P36268 569 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 MDH1P40925 334 aaKnown RBP7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 CDKN2AP42771 156 aaKnown RBP7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 PSMA6P60900 246 aaKnown RBP7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 ELF3P78545 371 aaPredicted RBP7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 TRAP1Q12931 704 aaKnown RBP7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 C11orf91Q3C1V1 193 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 SLC18B1Q6NT16 456 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 PGM2L1Q6PCE3 622 aa7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 METAP1DQ6UB28 335 aaPredicted RBP7.4□□□□□ -1.22
HNRNPC-227ENST00000556897 C1orf122Q6ZSJ8 110 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms