RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 CX3CR1P49238 355 aa9.75□□□□□ -0.85
SLIRP-206ENST00000556375 PRSS12P56730 875 aa9.75□□□□□ -0.85
SLIRP-206ENST00000556375 LMO4P61968 165 aa9.75□□□□□ -0.85
SLIRP-206ENST00000556375 MVKQ03426 396 aa9.75□□□□□ -0.85
SLIRP-206ENST00000556375 ZNF92Q03936 586 aa9.75□□□□□ -0.85
SLIRP-206ENST00000556375 APOFQ13790 326 aa9.75□□□□□ -0.85
SLIRP-206ENST00000556375 CHRFAM7AQ494W8 412 aa9.75□□□□□ -0.85
SLIRP-206ENST00000556375 GLYATL3Q5SZD4 288 aa9.75□□□□□ -0.85
SLIRP-206ENST00000556375 AVPI1Q5T686 147 aa9.75□□□□□ -0.85
SLIRP-206ENST00000556375 C12orf73Q69YU5 71 aa9.75□□□□□ -0.85
SLIRP-206ENST00000556375 SPATC1Q76KD6 591 aa9.75□□□□□ -0.85
SLIRP-206ENST00000556375 OR2AE1Q8NHA4 323 aa9.75□□□□□ -0.85
SLIRP-206ENST00000556375 RAB39BQ96DA2 213 aa9.75□□□□□ -0.85
SLIRP-206ENST00000556375 MEGF10Q96KG7 1140 aa9.75□□□□□ -0.85
SLIRP-206ENST00000556375 AMELYQ99218 206 aa9.75□□□□□ -0.85
SLIRP-206ENST00000556375 REPIN1Q9BWE0 567 aaKnown RBP9.75□□□□□ -0.85
SLIRP-206ENST00000556375 GABARAPL3Q9BY60 117 aa9.75□□□□□ -0.85
SLIRP-206ENST00000556375 SP140LQ9H930 580 aa9.75□□□□□ -0.85
SLIRP-206ENST00000556375 NOP16Q9Y3C1 178 aaKnown RBP9.75□□□□□ -0.85
SLIRP-206ENST00000556375 MXRA5Q9NR99 2828 aa9.75□□□□□ -0.85
SLIRP-206ENST00000556375 ATRQ13535 2644 aa9.75□□□□□ -0.85
SLIRP-206ENST00000556375 C5orf63A6NC05 138 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 CCDC182A6NF36 153 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 SAC3D1A6NKF1 404 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 CD300LBA8K4G0 201 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 H3BNX3 289 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 IFNL4K9M1U5 179 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 M0R129 80 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 PRKYO43930 277 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 ANXA2P07355 339 aaKnown RBP9.74□□□□□ -0.85
SLIRP-206ENST00000556375 H2BFMP0C1H6 154 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 SLC2A1P11166 492 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 SRP9P49458 86 aaKnown RBP9.74□□□□□ -0.85
SLIRP-206ENST00000556375 MMP16P51512 607 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 DVL1P1P54792 670 aaPredicted RBP9.74□□□□□ -0.85
SLIRP-206ENST00000556375 SLC16A9Q7RTY1 509 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 PEG10Q86TG7 708 aaKnown RBP9.74□□□□□ -0.85
SLIRP-206ENST00000556375 C10orf67Q8IYJ2 551 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 SPRYD4Q8WW59 207 aaPredicted RBP9.74□□□□□ -0.85
SLIRP-206ENST00000556375 SPSB4Q96A44 273 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 RBM4BQ9BQ04 359 aaKnown RBP9.74□□□□□ -0.85
SLIRP-206ENST00000556375 YIPF3Q9GZM5 350 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 SLC22A4Q9H015 551 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 SHARPINQ9H0F6 387 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 ZNF665Q9H7R5 613 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 TMEM106BQ9NUM4 274 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 TMEM100Q9NV29 134 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 DCAF16Q9NXF7 216 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 TREM2Q9NZC2 230 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 PPP1R3CQ9UQK1 317 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 KLHDC2Q9Y2U9 406 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 SVEP1Q4LDE5 3571 aa9.74□□□□□ -0.85
SLIRP-206ENST00000556375 ISPDA4D126 451 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 GGT3PA6NGU5 568 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 FAM157AC9JC47 383 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 F5H5P2 479 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 H0YL77 283 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 IGHV2-70P01814 119 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 IGHV2-5P01817 119 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 MSMBP08118 114 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 FAM157CP0CG43 387 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 ALOX5APP20292 161 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 HNF1AP20823 631 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 PCMT1P22061 227 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 GATA4P43694 442 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 ZNF121P58317 390 aaPredicted RBP9.73□□□□□ -0.85
SLIRP-206ENST00000556375 PSMA6P60900 246 aaKnown RBP9.73□□□□□ -0.85
SLIRP-206ENST00000556375 EFNB1P98172 346 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 AADACL4Q5VUY2 407 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 NXNL2Q5VZ03 156 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 PRSS45Q7RTY3 260 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 GLCCI1Q86VQ1 547 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 PRIMA1Q86XR5 153 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 CELF2-AS1Q8N7Q2 184 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 TCEANCQ8N8B7 351 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 OR56B2PQ8NGI1 322 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 OR52H1Q8NGJ2 320 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 OR51F2Q8NH61 342 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 TMEM163Q8TC26 289 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 THEM6Q8WUY1 208 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 RAB3IPQ96QF0 476 aaPredicted RBP9.73□□□□□ -0.85
SLIRP-206ENST00000556375 SIGLEC11Q96RL6 698 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 CNN2Q99439 309 aaKnown RBP9.73□□□□□ -0.85
SLIRP-206ENST00000556375 TEAD3Q99594 435 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 PKP2Q99959 881 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 GAL3ST1Q99999 423 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 ADAT1Q9BUB4 502 aaKnown RBP9.73□□□□□ -0.85
SLIRP-206ENST00000556375 NIPAL2Q9H841 368 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 GCM1Q9NP62 436 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 DNAJC27Q9NZQ0 273 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 MRPL15Q9P015 296 aaKnown RBP9.73□□□□□ -0.85
SLIRP-206ENST00000556375 LAMP5Q9UJQ1 280 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 NPTNQ9Y639 398 aa9.73□□□□□ -0.85
SLIRP-206ENST00000556375 SLC22A31A6NKX4 558 aa9.72□□□□□ -0.85
SLIRP-206ENST00000556375 TBX1O43435 398 aa9.72□□□□□ -0.85
SLIRP-206ENST00000556375 HLA-DPB1P04440 258 aa9.72□□□□□ -0.85
SLIRP-206ENST00000556375 MRPL3P09001 348 aaKnown RBP9.72□□□□□ -0.85
SLIRP-206ENST00000556375 CFL1P23528 166 aaKnown RBP9.72□□□□□ -0.85
SLIRP-206ENST00000556375 DDOSTP39656 456 aa9.72□□□□□ -0.85
SLIRP-206ENST00000556375 CD200P41217 278 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms