RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 VRK1Q99986 396 aaPredicted RBP6.23□□□□□ -1.41
TDP1-213ENST00000555880 NUDT16L1Q9BRJ7 211 aaKnown RBP6.23□□□□□ -1.41
TDP1-213ENST00000555880 C1QTNF6Q9BXI9 259 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 SEMA5BQ9P283 1151 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 FBXO4Q9UKT5 387 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 TNFSF18Q9UNG2 199 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 SLC5A6Q9Y289 635 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 TRBV11-1A0A0K0K1C0 115 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 OR14I1A6ND48 311 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 ZNF878C9JN71 531 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 RAB27BO00194 218 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 HPP00738 406 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 TTRP02766 147 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 CHRM2P08172 466 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 LIPCP11150 499 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 ZBTB25P24278 435 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 HRH1P35367 487 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 ZNF93P35789 620 aaPredicted RBP6.22□□□□□ -1.41
TDP1-213ENST00000555880 AFF3P51826 1226 aaKnown RBP6.22□□□□□ -1.41
TDP1-213ENST00000555880 CLDN6P56747 220 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 CFHR1Q03591 330 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 PPP1R1AQ13522 171 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 LRRC37A5PQ49AS3 106 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 ACTBL2Q562R1 376 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 RHBDD2Q6NTF9 364 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 C16orf47Q6ZP98 133 aaPredicted RBP6.22□□□□□ -1.41
TDP1-213ENST00000555880 C17orf107Q6ZR85 190 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 PGAP1Q75T13 922 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 OR2W3Q7Z3T1 314 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 ANKRD37Q7Z713 158 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 OR52N4Q8NGI2 321 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 OR10K1Q8NGX5 313 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 OR10R2Q8NGX6 335 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 LHFPL5Q8TAF8 219 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 MITD1Q8WV92 249 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 PPP1R1CQ8WVI7 109 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 NUDCD2Q8WVJ2 157 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 ST8SIA4Q92187 359 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 CMBLQ96DG6 245 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 ADAT3Q96EY9 351 aaPredicted RBP6.22□□□□□ -1.41
TDP1-213ENST00000555880 EMC6Q9BV81 110 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 ZNF471Q9BX82 626 aaPredicted RBP6.22□□□□□ -1.41
TDP1-213ENST00000555880 SHARPINQ9H0F6 387 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 DNTTIP1Q9H147 329 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 CHRDQ9H2X0 955 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 ZNF768Q9H5H4 540 aaKnown RBP6.22□□□□□ -1.41
TDP1-213ENST00000555880 METTL7AQ9H8H3 244 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 SEC61A2Q9H9S3 476 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 WNT16Q9UBV4 365 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 FBLN5Q9UBX5 448 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 ZNF230Q9UIE0 474 aaPredicted RBP6.22□□□□□ -1.41
TDP1-213ENST00000555880 VSIG4Q9Y279 399 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 ADAMTS20P59510 1910 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 LOC101059948A0A1B0GTJ6 334 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 C9orf170A2RU37 121 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 OR2AT4A6NND4 320 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 TEX46H3BTG2 121 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 CCSO14618 274 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 TOX3O15405 576 aaPredicted RBP6.22□□□□□ -1.41
TDP1-213ENST00000555880 DUS4LO95620 317 aaKnown RBP6.22□□□□□ -1.41
TDP1-213ENST00000555880 IL2RAP01589 272 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 AKR1C4P17516 323 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 HLA-GP17693 338 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 CD96P40200 585 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 CASRP41180 1078 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 LUMP51884 338 aaPredicted RBP6.22□□□□□ -1.41
TDP1-213ENST00000555880 EMP2P54851 167 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 CYCSP99999 105 aaKnown RBP6.22□□□□□ -1.41
TDP1-213ENST00000555880 ACY1Q03154 408 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 MYBPHQ13203 477 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 UNC119Q13432 240 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 ATXN7L3Q14CW9 347 aaPredicted RBP6.22□□□□□ -1.41
TDP1-213ENST00000555880 NKAIN1Q4KMZ8 207 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 ZNF385CQ66K41 422 aaPredicted RBP6.22□□□□□ -1.41
TDP1-213ENST00000555880 OR52W1Q6IF63 320 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 JMJD6Q6NYC1 403 aaPredicted RBP6.22□□□□□ -1.41
TDP1-213ENST00000555880 COX15Q7KZN9 410 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 KCTD9Q7L273 389 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 ANGPTL5Q86XS5 388 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 LYPD6Q86Y78 171 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 APCDD1LQ8NCL9 501 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 ZBTB44Q8NCP5 570 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 ADPRHL1Q8NDY3 354 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 NOXO1Q8NFA2 376 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 OR4K15Q8NH41 348 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 KCNG3Q8TAE7 436 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 OR51E1Q8TCB6 317 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 CASTOR1Q8WTX7 329 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 NUDT22Q9BRQ3 303 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 SELENOIQ9C0D9 397 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 CST11Q9H112 138 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 PTGES2Q9H7Z7 377 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 FANCFQ9NPI8 374 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 C12orf4Q9NQ89 552 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 RASL12Q9NYN1 266 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 TAS2R3Q9NYW6 316 aa6.22□□□□□ -1.41
TDP1-213ENST00000555880 MRPS28Q9Y2Q9 187 aaKnown RBP6.22□□□□□ -1.41
TDP1-213ENST00000555880 ABCA7Q8IZY2 2146 aa6.21□□□□□ -1.41
TDP1-213ENST00000555880 PHF3Q92576 2039 aaKnown RBP6.21□□□□□ -1.41
TDP1-213ENST00000555880 WDR87Q6ZQQ6 2873 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms