RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 PPP1R8Q12972 351 aaKnown RBP9.95□□□□□ -0.82
VRK1-204ENST00000555351 FLOT2Q14254 428 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 LINC01590Q5TEZ4 76 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 SHFQ7M4L6 423 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 NAA40Q86UY6 237 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 OR10AD1Q8NGE0 317 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 OR9Q1Q8NGQ5 310 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 RNF133Q8WVZ7 376 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 SPRYD4Q8WW59 207 aaPredicted RBP9.95□□□□□ -0.82
VRK1-204ENST00000555351 ITFG2Q969R8 447 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 SPSB4Q96A44 273 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 SLCO4A1Q96BD0 722 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 SLAMF6Q96DU3 332 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 NRBF2Q96F24 287 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 JMJD8Q96S16 334 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 COPS4Q9BT78 406 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 WDR76Q9H967 626 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 ZNF556Q9HAH1 456 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 DCAF16Q9NXF7 216 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 DNAJB9Q9UBS3 223 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 MIOXQ9UGB7 285 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 F5H5P2 479 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 H0YL77 283 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 H3BN98 237 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 PRODHO43272 600 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 DNAJC8O75937 253 aaPredicted RBP9.94□□□□□ -0.82
VRK1-204ENST00000555351 GLCEO94923 617 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 AVPP01185 164 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 SPARCP09486 303 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 WNT2P09544 360 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 PPIAL4GP0DN37 164 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 OSMP13725 252 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 IRF2P14316 349 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 EPHA1P21709 976 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 CFL1P23528 166 aaKnown RBP9.94□□□□□ -0.82
VRK1-204ENST00000555351 RAD23AP54725 363 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 LCN2P80188 198 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 ZNF92Q03936 586 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 MZT1Q08AG7 82 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 MAB21L1Q13394 359 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 TAF13Q15543 124 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 SNCBQ16143 134 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 ESCO2Q56NI9 601 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 ZNF511Q8NB15 262 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 BHLHE23Q8NDY6 225 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 SEMA6DQ8NFY4 1073 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 OR51L1Q8NGJ5 315 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 OR6K6Q8NGW6 343 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 OR11L1Q8NGX0 322 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 SLC7A6OSQ96CW6 309 aaPredicted RBP9.94□□□□□ -0.82
VRK1-204ENST00000555351 PLEKHA8Q96JA3 519 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 INTS14Q96SY0 518 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 SUCNR1Q9BXA5 334 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 TEX12Q9BXU0 123 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 OCEL1Q9H607 264 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 C7orf69Q9H7B7 122 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 TMEM165Q9HC07 324 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 TRIM36Q9NQ86 728 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 PDP1Q9P0J1 537 aaPredicted RBP9.94□□□□□ -0.82
VRK1-204ENST00000555351 OPN4Q9UHM6 478 aa9.94□□□□□ -0.82
VRK1-204ENST00000555351 FBN3Q75N90 2809 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 LOC105371242A0A075B767 164 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 CEACAM18A8MTB9 384 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 E2F6O75461 281 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 GYPBP06028 91 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 PSKH1P11801 424 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 ZNF12P17014 697 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 FPR2P25090 351 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 ZFP36P26651 326 aaKnown RBP9.93□□□□□ -0.82
VRK1-204ENST00000555351 GSTT1P30711 240 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 RPS27P42677 84 aaKnown RBP9.93□□□□□ -0.82
VRK1-204ENST00000555351 RASSF2P50749 326 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 HILS1P60008 231 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 CDK5Q00535 292 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 DBPQ10586 325 aaPredicted RBP9.93□□□□□ -0.82
VRK1-204ENST00000555351 OR8G1Q15617 311 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 KCNJ8Q15842 424 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 TUSC1Q2TAM9 212 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 SNAI3Q3KNW1 292 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 ZNF404Q494X3 552 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 SLC35D3Q5M8T2 416 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 LYPD4Q6UWN0 246 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 DCDC5Q6ZRR9 648 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 MOGAT3Q86VF5 341 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 SPATA24Q86W54 205 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 TIGD4Q8IY51 512 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 ZNF454Q8N9F8 522 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 DEFB108BQ8NET1 73 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 OR52H1Q8NGJ2 320 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 NEIL1Q96FI4 390 aaPredicted RBP9.93□□□□□ -0.82
VRK1-204ENST00000555351 MMADHCQ9H3L0 296 aaPredicted RBP9.93□□□□□ -0.82
VRK1-204ENST00000555351 RGCCQ9H4X1 137 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 FN3KRPQ9HA64 309 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 CENPMQ9NSP4 180 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 POMPQ9Y244 141 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 PPIAL4AQ9Y536 164 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 INSIG2Q9Y5U4 225 aa9.93□□□□□ -0.82
VRK1-204ENST00000555351 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.92□□□□□ -0.82
VRK1-204ENST00000555351 GGT3PA6NGU5 568 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 PRR23D1E9PI22 279 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms