RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 KLK11Q9UBX7 282 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 FOXJ3Q9UPW0 622 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 FRG2CA6NGY1 282 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 GUSBP08236 651 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 SLC16A12Q6ZSM3 486 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 ANKRD53Q8N9V6 530 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 DTWD2Q8NBA8 298 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 TMEM178AQ8NBL3 297 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 TMEM104Q8NE00 496 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 MARCH1Q8TCQ1 289 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 FBXW5Q969U6 566 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 C6orf106Q9H6K1 298 aaPredicted RBP12.64□□□□□ -0.39
VTI1B-204ENST00000554659 BTAF1O14981 1849 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 ADAMTSL3P82987 1691 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 RREB1Q92766 1687 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 MAP1BP46821 2468 aaKnown RBP12.64□□□□□ -0.39
VTI1B-204ENST00000554659 CRYM-AS1A6NIL9 109 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 G3V3Q6 166 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 SLC17A2O00624 439 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 CRYBB2P43320 205 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 WNT3P56703 355 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 BTG2P78543 158 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 KIAA0040Q15053 153 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 KIRREL2Q6UWL6 708 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 ZFP62Q8NB50 900 aaPredicted RBP12.64□□□□□ -0.39
VTI1B-204ENST00000554659 PPP1R1CQ8WVI7 109 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 RFPL4AA6NLU0 287 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 RFPL4AL1F8VTS6 287 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 SDCBPO00560 298 aaPredicted RBP12.64□□□□□ -0.39
VTI1B-204ENST00000554659 TBXA2RP21731 343 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 MPGP29372 298 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 OR8B8Q15620 311 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 SPANXN5Q5MJ07 72 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 RPUSD3Q6P087 351 aaKnown RBP12.64□□□□□ -0.39
VTI1B-204ENST00000554659 BHLHE23Q8NDY6 225 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 OR5M1Q8NGP8 315 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 OR13D1Q8NGV5 346 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 LHX4Q969G2 390 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 WDR89Q96FK6 387 aaPredicted RBP12.64□□□□□ -0.39
VTI1B-204ENST00000554659 OXGR1Q96P68 337 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 CTDSP1Q9GZU7 261 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 MMP17Q9ULZ9 603 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 PLRG1O43660 514 aaKnown RBP12.63□□□□□ -0.39
VTI1B-204ENST00000554659 SELEP16581 610 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 SUMO1P63165 101 aaKnown RBP12.63□□□□□ -0.39
VTI1B-204ENST00000554659 H3F3AP84243 136 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 FAM27D1Q5T7N8 215 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 ARHGEF39Q8N4T4 335 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 TSLPQ969D9 159 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 TMEM18Q96B42 140 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 IL21Q9HBE4 155 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 GAR1Q9NY12 217 aaKnown RBP12.63□□□□□ -0.39
VTI1B-204ENST00000554659 NDRG3Q9UGV2 375 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 WNT11O96014 354 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 CT45A10P0DMU9 189 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 CAPZBP47756 277 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 RAE1P78406 368 aaKnown RBP12.63□□□□□ -0.39
VTI1B-204ENST00000554659 FABP9Q0Z7S8 132 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 FAM53BQ14153 422 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 PRAMEF5Q5TYX0 476 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 PRAMEF6Q5VXH4 476 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 ASTLQ6HA08 431 aaPredicted RBP12.63□□□□□ -0.39
VTI1B-204ENST00000554659 DND1Q8IYX4 353 aaKnown RBP12.63□□□□□ -0.39
VTI1B-204ENST00000554659 FBXL6Q8N531 539 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 OR51I2Q9H344 312 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 IDSB3KWA1 339 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 C1QAP02745 245 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 CD37P11049 281 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 RPS27P42677 84 aaKnown RBP12.63□□□□□ -0.39
VTI1B-204ENST00000554659 CCR5P51681 352 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 RAG2P55895 527 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 RPL11P62913 178 aaKnown RBP12.63□□□□□ -0.39
VTI1B-204ENST00000554659 PNLIPRP3Q17RR3 467 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 MRGPRX4Q96LA9 322 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 B9D1Q9UPM9 204 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 IGLV3-16A0A075B6K0 115 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 HS3ST1O14792 307 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 TIGITQ495A1 244 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 LAIR1Q6GTX8 287 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 TMPRSS11FQ6ZWK6 438 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 ZNF561Q8N587 486 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 PATE1Q8WXA2 126 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 NMES1Q9C002 83 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 POLDIP2Q9Y2S7 368 aa12.63□□□□□ -0.39
VTI1B-204ENST00000554659 KCNE1BA0A087WTH5 132 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 NKX6-3A6NJ46 265 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 CEACAM5P06731 702 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 GRPP07492 148 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 KCNAB1Q14722 419 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 UQCC3Q6UW78 93 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 OR52B4Q8NGK2 314 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 RXFP4Q8TDU9 374 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 SLC17A5Q9NRA2 495 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 AQP7P3A6NL99 342 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 OR5H8P0DN80 308 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 TCN2P20062 427 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 ZP3P21754 424 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 PAX6P26367 422 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 IL3RAP26951 378 aa12.62□□□□□ -0.39
VTI1B-204ENST00000554659 HES1Q14469 280 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms