RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 AQP12AQ8IXF9 295 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 PACRGLQ8N7B6 248 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 MYEOVQ96EZ4 313 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 A0A1B0GTH9 108 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 TNFRSF10AO00220 468 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 SPINT2O43291 252 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 HPGDSO60760 199 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 SAA1P0DJI8 122 aaPredicted RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 GZMBP10144 247 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 JUNBP17275 347 aaPredicted RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 KCNJ10P78508 379 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 TBCEQ15813 527 aaPredicted RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 OR2T2Q6IF00 324 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 GMPPAQ96IJ6 420 aaPredicted RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 OR4C12Q96R67 309 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 FBXL17Q9UF56 701 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 NPIPB15A6NHN6 443 aaPredicted RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 GFYI3L273 518 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 GLCEO94923 617 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 FBP1P09467 338 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 PBX1P40424 430 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 RPL26P61254 145 aaKnown RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 RACK1P63244 317 aaKnown RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF384Q8TF68 577 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 LRRC3BQ96PB8 259 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 TTYH3Q9C0H2 523 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 NOX4Q9NPH5 578 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 ARL6IP5O75915 188 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF767PQ75MW2 155 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 SYNPRQ8TBG9 265 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF331Q9NQX6 463 aaPredicted RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 SLC23A1Q9UHI7 598 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 NCOA6Q14686 2063 aaPredicted RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 FITM1A5D6W6 292 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 OR6C68A6NDL8 312 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 F5H5P2 479 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 LSM11P83369 360 aaKnown RBP eCLIP3□□□□□ -1.93
SYNE2-212ENST00000554584 TMEM215Q68D42 235 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 GUSBP11Q6P575 273 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 ALKAL2Q6UX46 152 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 CARFQ8N187 725 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 LRRC29Q8WV35 223 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 SFRP2Q96HF1 295 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 PITHD1Q9GZP4 211 aaPredicted RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 RIMS4Q9H426 269 aaPredicted RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF586Q9NXT0 402 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 ICAM5Q9UMF0 924 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 SLCO1B1Q9Y6L6 691 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 C9JCJ5 164 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 FAAHO00519 579 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 HSPB1P04792 205 aaKnown RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 HNRNPA3P51991 378 aaKnown RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 FZD5Q13467 585 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 PMS2P11Q13670 270 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 PRSS45Q7RTY3 260 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 OR2T35Q8NGX2 323 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 CPNE7Q9UBL6 633 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 COA3Q9Y2R0 106 aaPredicted RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 CCL27Q9Y4X3 112 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 DUXAA6NLW8 204 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 GSRP00390 522 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 UBCP0CG48 685 aaKnown RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 RPE65Q16518 533 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 Q5PR19 223 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF582Q96NG8 517 aaPredicted RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 THAP7Q9BT49 309 aaPredicted RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 KCNMB3Q9NPA1 279 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 GALR2O43603 387 aaPredicted RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 DFFBO76075 338 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 AGR2O95994 175 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 CGB7P0DN87 165 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 CDAP32320 146 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 FOXA1P55317 472 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 TMPRSS3P57727 454 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 LEXMQ3ZCV2 418 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 GLIPR1L1Q6UWM5 242 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 CATSPERDQ86XM0 798 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 SDHAF2Q9NX18 166 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 SLC22A13Q9Y226 551 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 VSIG4Q9Y279 399 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 EXOSC1Q9Y3B2 195 aaKnown RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 BTAF1O14981 1849 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF727A8MUV8 499 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF736B4DX44 427 aaPredicted RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 LHBP01229 141 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 OR5AL1P0C617 328 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 IVDP26440 423 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 LIPAP38571 399 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 CXCR4P61073 352 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 CYCSP99999 105 aaKnown RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 CTSL3PQ5NE16 218 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 SLC39A11Q8N1S5 342 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 MINDY1Q8N5J2 469 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 SLC26A10Q8NG04 563 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 OR4C13Q8NGP0 309 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 NOL4LQ96MY1 436 aaPredicted RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 SLC30A3Q99726 388 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 CPPED1Q9BRF8 314 aaPredicted RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 ADAMTS5Q9UNA0 930 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 HILPDAQ9Y5L2 63 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms