RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 TMEM100Q9NV29 134 aa8.77□□□□□ -1.01
PTCD2P1-201ENST00000554393 DCAF16Q9NXF7 216 aa8.77□□□□□ -1.01
PTCD2P1-201ENST00000554393 POLR3KQ9Y2Y1 108 aaPredicted RBP8.77□□□□□ -1.01
PTCD2P1-201ENST00000554393 NOP16Q9Y3C1 178 aaKnown RBP8.77□□□□□ -1.01
PTCD2P1-201ENST00000554393 TCRBV3S1A0A5B6 114 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 A8MXK9 166 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 ZNF878C9JN71 531 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 H3BN98 237 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 TMEM178BH3BS89 294 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 GNGT2O14610 69 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 MLNRO43193 412 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 TCF21O43680 179 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 E2F6O75461 281 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 DNAJC8O75937 253 aaPredicted RBP8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 GYPBP06028 91 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 SPARCP09486 303 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 PSKH1P11801 424 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 PAICSP22234 425 aaKnown RBP8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 MDH2P40926 338 aaKnown RBP8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 RPS27P42677 84 aaKnown RBP8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 GATA4P43694 442 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 SLC15A1P46059 708 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 KRTAP24-1Q3LI83 254 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 DCAF12L2Q5VW00 463 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 FAHD2BQ6P2I3 314 aaPredicted RBP8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 LYPD4Q6UWN0 246 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 PGAP1Q75T13 922 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 MRPL21Q7Z2W9 205 aaKnown RBP8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 SPATA24Q86W54 205 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 C1orf87Q8N0U7 546 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 BHLHE23Q8NDY6 225 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 OR10AD1Q8NGE0 317 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 OR51L1Q8NGJ5 315 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 OR6K6Q8NGW6 343 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 ERGIC1Q969X5 290 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 SLAMF6Q96DU3 332 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 FAHD2AQ96GK7 314 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 KCNJ15Q99712 375 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 COPS4Q9BT78 406 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 TMPRSS13Q9BYE2 586 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 TOR3AQ9H497 397 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 WDR76Q9H967 626 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 MARCH7Q9H992 704 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 ZNF556Q9HAH1 456 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 PATZ1Q9HBE1 687 aaKnown RBP8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 UBAP1Q9NZ09 502 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 PDP1Q9P0J1 537 aaPredicted RBP8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 DNAJB9Q9UBS3 223 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 PCDHB10Q9UN67 800 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 POMPQ9Y244 141 aa8.76□□□□□ -1.01
PTCD2P1-201ENST00000554393 LRRC30A6NM36 301 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 F5H0A9 414 aaPredicted RBP8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 F5H5P2 479 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 ZNF593O00488 134 aaPredicted RBP8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 XRCC2O43543 280 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 FKBP6O75344 327 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 GLCEO94923 617 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 PTBP3O95758 552 aaKnown RBP8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 APOC1P02654 83 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 SBK2P0C263 348 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 CLUP10909 449 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 OSMP13725 252 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 ANXA8P13928 327 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 CD200P41217 278 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 SLC6A9P48067 706 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 GRB2P62993 217 aaKnown RBP8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 CBX1P83916 185 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 ZMYND11Q15326 602 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 SNAI3Q3KNW1 292 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 LCE2CQ5TA81 110 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 C1orf229Q6ZS94 237 aaPredicted RBP8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 SHFQ7M4L6 423 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 C1QL2Q7Z5L3 287 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 TMEM179BQ7Z7N9 219 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 NAA40Q86UY6 237 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 KLBQ86Z14 1044 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 Q8TCH9 128 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 RNF133Q8WVZ7 376 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 SPRYD4Q8WW59 207 aaPredicted RBP8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 SLCO4A1Q96BD0 722 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 NRBF2Q96F24 287 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 INTS14Q96SY0 518 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 METTL17Q9H7H0 456 aaPredicted RBP8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 SP140LQ9H930 580 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 MRPL15Q9P015 296 aaKnown RBP8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 LRCH1Q9Y2L9 728 aa8.75□□□□□ -1.01
PTCD2P1-201ENST00000554393 FAM183AA6NL82 134 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 CD300LBA8K4G0 201 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 H0YL77 283 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 GSC2O15499 205 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 PRODHO43272 600 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 GMDSO60547 372 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 HMGN1P05114 100 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 GSTT1P30711 240 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 DDOSTP39656 456 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 RASSF2P50749 326 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 RAD23AP54725 363 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 LCN2P80188 198 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 CDK5Q00535 292 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 ZNF92Q03936 586 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms