RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 ZNF670-ZNF695F2Z2N8 137 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 LYNX1G3V0Z9 82 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 RER1O15258 196 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 MAGEB4O15481 346 aaPredicted RBP12□□□□□ -0.49
SPTLC2-202ENST00000554365 IGKV3-15P01624 115 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 PATE4P0C8F1 98 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 LYNX1P0DP58 116 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 PCMT1P22061 227 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 EEF1B2P24534 225 aaKnown RBP12□□□□□ -0.49
SPTLC2-202ENST00000554365 MAP2K4P45985 399 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 ACTC1P68032 377 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 ACTA1P68133 377 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 AQP6Q13520 282 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 EIF2B1Q14232 305 aaKnown RBP12□□□□□ -0.49
SPTLC2-202ENST00000554365 GALEQ14376 348 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 CCDC92Q53HC0 331 aaPredicted RBP12□□□□□ -0.49
SPTLC2-202ENST00000554365 DCXRQ7Z4W1 244 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 LHFPL3Q86UP9 236 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12□□□□□ -0.49
SPTLC2-202ENST00000554365 ZNF454Q8N9F8 522 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 TSPAN14Q8NG11 270 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 UBASH3BQ8TF42 649 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 HPS1Q92902 700 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 ZNF75AQ96N20 296 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 DOK1Q99704 481 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 TTTY10Q9BZA0 68 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 TPK1Q9H3S4 243 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 INPP5EQ9NRR6 644 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 B3GNT2Q9NY97 397 aa12□□□□□ -0.49
SPTLC2-202ENST00000554365 LSM2Q9Y333 95 aaKnown RBP12□□□□□ -0.49
SPTLC2-202ENST00000554365 IGHV2OR16-5A0A0B4J2B6 119 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 TMEM129A0AVI4 362 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 DAPL1A0PJW8 107 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 ABHD16AO95870 558 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 PTHP01270 115 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 HLA-HP01893 362 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 HOXB1P14653 301 aaPredicted RBP11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 CBR1P16152 277 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 ZNF32P17041 273 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 GUCA1AP43080 201 aaPredicted RBP11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 CAPZA2P47755 286 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 CDONQ4KMG0 1287 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 ZNF322Q6U7Q0 402 aaPredicted RBP11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 SLC16A14Q7RTX9 510 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 SYT9Q86SS6 491 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 NANOGP1Q8N7R0 232 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 FAM169BQ8N8A8 192 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 THEM6Q8WUY1 208 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 RNF133Q8WVZ7 376 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 RNF166Q96A37 237 aaPredicted RBP11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 WACQ9BTA9 647 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 ALG8Q9BVK2 526 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 WNT5BQ9H1J7 359 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 SLCO1C1Q9NYB5 712 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 MRM2Q9UI43 246 aaKnown RBP11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 METRNQ9UJH8 293 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 LAMP5Q9UJQ1 280 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 POLR1DQ9Y2S0 133 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 TMEM14AQ9Y6G1 99 aa11.99□□□□□ -0.49
SPTLC2-202ENST00000554365 FARS2O95363 451 aaKnown RBP11.98□□□□□ -0.49
SPTLC2-202ENST00000554365 ARR3P36575 388 aa11.98□□□□□ -0.49
SPTLC2-202ENST00000554365 OPRL1P41146 370 aa11.98□□□□□ -0.49
SPTLC2-202ENST00000554365 PSG4Q00888 419 aa11.98□□□□□ -0.49
SPTLC2-202ENST00000554365 ROM1Q03395 351 aa11.98□□□□□ -0.49
SPTLC2-202ENST00000554365 EMX1Q04741 257 aaPredicted RBP11.98□□□□□ -0.49
SPTLC2-202ENST00000554365 SNTB2Q13425 540 aaKnown RBP11.98□□□□□ -0.49
SPTLC2-202ENST00000554365 RIN1Q13671 783 aa11.98□□□□□ -0.49
SPTLC2-202ENST00000554365 TBCEQ15813 527 aaPredicted RBP11.98□□□□□ -0.49
SPTLC2-202ENST00000554365 RSPO1Q2MKA7 263 aaPredicted RBP11.98□□□□□ -0.49
SPTLC2-202ENST00000554365 OR2G6Q5TZ20 316 aa11.98□□□□□ -0.49
SPTLC2-202ENST00000554365 XAF1Q6GPH4 301 aa11.98□□□□□ -0.49
SPTLC2-202ENST00000554365 ASB17Q8WXJ9 295 aa11.98□□□□□ -0.49
SPTLC2-202ENST00000554365 SLAMF6Q96DU3 332 aa11.98□□□□□ -0.49
SPTLC2-202ENST00000554365 OR8B4Q96RC9 309 aa11.98□□□□□ -0.49
SPTLC2-202ENST00000554365 CDADC1Q9BWV3 514 aa11.98□□□□□ -0.49
SPTLC2-202ENST00000554365 OR2H1Q9GZK4 316 aa11.98□□□□□ -0.49
SPTLC2-202ENST00000554365 CCDC90BQ9GZT6 254 aa11.98□□□□□ -0.49
SPTLC2-202ENST00000554365 C1orf198Q9H425 327 aa11.98□□□□□ -0.49
SPTLC2-202ENST00000554365 METTL17Q9H7H0 456 aaPredicted RBP11.98□□□□□ -0.49
SPTLC2-202ENST00000554365 ISG20L2Q9H9L3 353 aaKnown RBP11.98□□□□□ -0.49
SPTLC2-202ENST00000554365 ACOT13Q9NPJ3 140 aa11.98□□□□□ -0.49
SPTLC2-202ENST00000554365 A0A087WXM4 84 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 OR6C6A6NF89 314 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 PSMD9O00233 223 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 PHYHO14832 338 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 SYNGR3O43761 229 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 VENTXO95231 258 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 MYL12AP19105 171 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 CFPP27918 469 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 DVL1P1P54792 670 aaPredicted RBP11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 OR12D2P58182 307 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 PCBD1P61457 104 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 EGR3Q06889 387 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 KRTAP27-1Q3LI81 207 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 SLC36A2Q495M3 483 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 TP53I3Q53FA7 332 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 ZNF774Q6NX45 483 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 TMEM154Q6P9G4 183 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 LRRN1Q6UXK5 716 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 SPATC1Q76KD6 591 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms