RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 RAB2BQ8WUD1 216 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 SLC7A6Q92536 515 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 RORBQ92753 470 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 MYDGFQ969H8 173 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 APOBEC3DQ96AK3 386 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-211ENST00000554310 DIRC2Q96SL1 478 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 BCL7BQ9BQE9 202 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 CDADC1Q9BWV3 514 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 CCDC90BQ9GZT6 254 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 SAP30LQ9HAJ7 183 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 ZNF275Q9NSD4 429 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-211ENST00000554310 DECR2Q9NUI1 292 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 AASSQ9UDR5 926 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 CYB5R1Q9UHQ9 305 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 ZDHHC8Q9ULC8 765 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 GRIP1Q9Y3R0 1128 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 TANC2Q9HCD6 1990 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 IGHV1-69-2A0A0G2JMI3 117 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 ZSCAN5BA6NJL1 495 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 RIIAD1A6NNX1 92 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 H3BN98 237 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 TPD52L2O43399 206 aaKnown RBP11.12□□□□□ -0.63
SHMT2-211ENST00000554310 LILRA1O75019 489 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 IGHV1-46P01743 117 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 MT-ND2P03891 347 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 ZNF823P16415 610 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 ZNF3P17036 446 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 KITLGP21583 273 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 PYCR1P32322 319 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 CRYBB2P43320 205 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 SLC25A1P53007 311 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 GP2P55259 537 aaKnown RBP11.12□□□□□ -0.63
SHMT2-211ENST00000554310 SNRPGP62308 76 aaKnown RBP11.12□□□□□ -0.63
SHMT2-211ENST00000554310 PSG7Q13046 419 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 DYNC1I2Q13409 638 aaKnown RBP11.12□□□□□ -0.63
SHMT2-211ENST00000554310 CRMP1Q14194 572 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 ZNF362Q5T0B9 420 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-211ENST00000554310 CORO6Q6QEF8 472 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 CFAP77Q6ZQR2 320 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 LINC00346Q8IVM7 164 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 OR5L1Q8NGL2 311 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 TRUB1Q8WWH5 349 aaKnown RBP11.12□□□□□ -0.63
SHMT2-211ENST00000554310 FCGR1BQ92637 280 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 GTF3AQ92664 365 aaKnown RBP11.12□□□□□ -0.63
SHMT2-211ENST00000554310 YIPF5Q969M3 257 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 ELMOD3Q96FG2 381 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 ATF6BQ99941 703 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 NMNAT2Q9BZQ4 307 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 EGLN1Q9GZT9 426 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 CMC2Q9NRP2 79 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 MRPL22Q9NWU5 206 aaKnown RBP11.12□□□□□ -0.63
SHMT2-211ENST00000554310 CLN6Q9NWW5 311 aa11.12□□□□□ -0.63
SHMT2-211ENST00000554310 LOC100289279A0A1B0GTE1 492 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 LRP5LA4QPB2 252 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 SPRY3O43610 288 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 INMTO95050 263 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 CDK1P06493 297 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 CD55P08174 381 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 DBHP09172 617 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 RAC2P15153 192 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 COL8A2P25067 703 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 GRK5P34947 590 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 BLVRAP53004 296 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 DBPQ10586 325 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-211ENST00000554310 TBCEQ15813 527 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-211ENST00000554310 TSTQ16762 297 aaKnown RBP11.11□□□□□ -0.63
SHMT2-211ENST00000554310 KRTAP27-1Q3LI81 207 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 UBE2UQ5VVX9 321 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 FAM166AQ6J272 317 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 FBXW12Q6X9E4 464 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 AHSA2Q719I0 299 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 ANKRD13BQ86YJ7 626 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 OR9Q1Q8NGQ5 310 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 GGHQ92820 318 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 MSI2Q96DH6 328 aaKnown RBP11.11□□□□□ -0.63
SHMT2-211ENST00000554310 COPS4Q9BT78 406 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 POFUT1Q9H488 388 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 SLC25A19Q9HC21 320 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 ACOT13Q9NPJ3 140 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 PNRC2Q9NPJ4 139 aaKnown RBP11.11□□□□□ -0.63
SHMT2-211ENST00000554310 CNOT2Q9NZN8 540 aaKnown RBP11.11□□□□□ -0.63
SHMT2-211ENST00000554310 LPAR3Q9UBY5 353 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 PURGQ9UJV8 347 aaKnown RBP11.11□□□□□ -0.63
SHMT2-211ENST00000554310 CDC42EP3Q9UKI2 254 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 KCNS2Q9ULS6 477 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 STARD10Q9Y365 291 aa11.11□□□□□ -0.63
SHMT2-211ENST00000554310 ANK3Q12955 4377 aaKnown RBP11.11□□□□□ -0.63
SHMT2-211ENST00000554310 EFCAB10A6NFE3 127 aa11.1□□□□□ -0.63
SHMT2-211ENST00000554310 CLDN25C9JDP6 229 aa11.1□□□□□ -0.63
SHMT2-211ENST00000554310 PPIHO43447 177 aaKnown RBP11.1□□□□□ -0.63
SHMT2-211ENST00000554310 CDC14BO60729 498 aa11.1□□□□□ -0.63
SHMT2-211ENST00000554310 PIPP12273 146 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-211ENST00000554310 SPI1P17947 270 aa11.1□□□□□ -0.63
SHMT2-211ENST00000554310 TNFSF4P23510 183 aa11.1□□□□□ -0.63
SHMT2-211ENST00000554310 POU1F1P28069 291 aa11.1□□□□□ -0.63
SHMT2-211ENST00000554310 HFEQ30201 348 aa11.1□□□□□ -0.63
SHMT2-211ENST00000554310 CHRFAM7AQ494W8 412 aa11.1□□□□□ -0.63
SHMT2-211ENST00000554310 TMEM236Q5W0B7 351 aa11.1□□□□□ -0.63
SHMT2-211ENST00000554310 SLC27A4Q6P1M0 643 aa11.1□□□□□ -0.63
SHMT2-211ENST00000554310 COLCA1Q6ZS62 124 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms