RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 MUC15Q8N387 334 aa10.51□□□□□ -0.73
SHMT2-209ENST00000553949 NANOGP1Q8N7R0 232 aa10.51□□□□□ -0.73
SHMT2-209ENST00000553949 OR8B12Q8NGG6 310 aa10.51□□□□□ -0.73
SHMT2-209ENST00000553949 SYNPRQ8TBG9 265 aa10.51□□□□□ -0.73
SHMT2-209ENST00000553949 GATAD2BQ8WXI9 593 aa10.51□□□□□ -0.73
SHMT2-209ENST00000553949 PPP1R14AQ96A00 147 aa10.51□□□□□ -0.73
SHMT2-209ENST00000553949 MRPL24Q96A35 216 aaKnown RBP10.51□□□□□ -0.73
SHMT2-209ENST00000553949 SGK3Q96BR1 496 aa10.51□□□□□ -0.73
SHMT2-209ENST00000553949 CMBLQ96DG6 245 aa10.51□□□□□ -0.73
SHMT2-209ENST00000553949 MRPL37Q9BZE1 423 aaKnown RBP10.51□□□□□ -0.73
SHMT2-209ENST00000553949 CCDC90BQ9GZT6 254 aa10.51□□□□□ -0.73
SHMT2-209ENST00000553949 PLK3Q9H4B4 646 aa10.51□□□□□ -0.73
SHMT2-209ENST00000553949 MOB1AQ9H8S9 216 aa10.51□□□□□ -0.73
SHMT2-209ENST00000553949 FAIMQ9NVQ4 179 aa10.51□□□□□ -0.73
SHMT2-209ENST00000553949 NUFIP1Q9UHK0 495 aaKnown RBP10.51□□□□□ -0.73
SHMT2-209ENST00000553949 OR52A1Q9UKL2 312 aa10.51□□□□□ -0.73
SHMT2-209ENST00000553949 GTF2A1LQ9UNN4 478 aa10.51□□□□□ -0.73
SHMT2-209ENST00000553949 DCHS2Q6V1P9 2916 aa10.51□□□□□ -0.73
SHMT2-209ENST00000553949 CRYBG3Q68DQ2 2970 aa10.51□□□□□ -0.73
SHMT2-209ENST00000553949 HECTD1Q9ULT8 2610 aa10.51□□□□□ -0.73
SHMT2-209ENST00000553949 ABCA4P78363 2273 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 E9PI62 339 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 XRCC2O43543 280 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 MRPS14O60783 128 aaKnown RBP10.5□□□□□ -0.73
SHMT2-209ENST00000553949 CLPTM1O96005 669 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 DANCRP0C864 163 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 MPV17P39210 176 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 CHN2P52757 468 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 GBX2P52951 348 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-209ENST00000553949 KLF3P57682 345 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-209ENST00000553949 ZNF92Q03936 586 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 PSG7Q13046 419 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 EFNB3Q15768 340 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 KCTD21Q4G0X4 260 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 WDR38Q5JTN6 314 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 AGAP6Q5VW22 663 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 FDX2Q6P4F2 183 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 FBXW12Q6X9E4 464 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 C20orf204Q6ZNR8 217 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 PGAP1Q75T13 922 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 MRPL21Q7Z2W9 205 aaKnown RBP10.5□□□□□ -0.73
SHMT2-209ENST00000553949 LRP11Q86VZ4 500 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 KLBQ86Z14 1044 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 ELMOD2Q8IZ81 293 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 PRSS35Q8N3Z0 413 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 ZNF485Q8NCK3 441 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 OR2G2Q8NGZ5 317 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 OR2AE1Q8NHA4 323 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 HAVCR2Q8TDQ0 301 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 SPSB4Q96A44 273 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 REEP6Q96HR9 211 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 SYT3Q9BQG1 590 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 MND1Q9BWT6 205 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 RGCCQ9H4X1 137 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 BABAM2Q9NXR7 383 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 FRRS1LQ9P0K9 344 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 DUSP13Q9UII6 198 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 SLC22A13Q9Y226 551 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 FBN2P35556 2912 aa10.5□□□□□ -0.73
SHMT2-209ENST00000553949 NBPF19A0A087WUL8 3843 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 RTTNQ86VV8 2226 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 IGLV3-9A0A075B6K5 115 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 A0A0U1RQV5 110 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 A0A1W2PPW3 197 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 TRIM64A6NGJ6 449 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 B9A039 149 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 IGHV3-13P01766 116 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 TTRP02766 147 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 SOD3P08294 240 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 RAC2P15153 192 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 CFL1P23528 166 aaKnown RBP10.49□□□□□ -0.73
SHMT2-209ENST00000553949 TGM4P49221 684 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 EVX1P49640 407 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 GTF2A1P52655 376 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-209ENST00000553949 CDH15P55291 814 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 WNT4P56705 351 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 PRSS12P56730 875 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 SELENOVP59797 346 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 NANOS3P60323 173 aaKnown RBP10.49□□□□□ -0.73
SHMT2-209ENST00000553949 ALKBH1Q13686 389 aaKnown RBP10.49□□□□□ -0.73
SHMT2-209ENST00000553949 MST1LQ2TV78 715 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 GFOD2Q3B7J2 385 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 TMEM255AQ5JRV8 349 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 HAVCR1Q96D42 359 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 REPIN1Q9BWE0 567 aaKnown RBP10.49□□□□□ -0.73
SHMT2-209ENST00000553949 OPA3Q9H6K4 179 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 TRIM36Q9NQ86 728 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 CBLN4Q9NTU7 201 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 MYEF2Q9P2K5 600 aaKnown RBP10.49□□□□□ -0.73
SHMT2-209ENST00000553949 LAMP3Q9UQV4 416 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 CELSR2Q9HCU4 2923 aa10.49□□□□□ -0.73
SHMT2-209ENST00000553949 TNFAIP8O95379 198 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 LALBAP00709 142 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 IGLV3-1P01715 115 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 CD8AP01732 235 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 KITLGP21583 273 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 KIR3DL2P43630 455 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 MAP2K4P45985 399 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 CCR9P51686 369 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 SNRPD2P62316 118 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms