RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 TEX13CA0A0J9YWL9 993 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 A0A1B0GVI7 797 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 TCRBV4S1A1TA0A5B7 111 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 LRRC30A6NM36 301 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 A8MVM7 634 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 HNRNPCL3B7ZW38 293 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 H3BSA7 217 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 H3BUX3 64 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 DNALI1O14645 258 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-223ENST00000553686 HNRNPCL1O60812 293 aaKnown RBP4.68□□□□□ -1.66
ATXN3-223ENST00000553686 SMIM24O75264 130 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 FARS2O95363 451 aaKnown RBP4.68□□□□□ -1.66
ATXN3-223ENST00000553686 ALDOBP05062 364 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 TFPTP0C1Z6 253 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 HNRNPCL4P0DMR1 293 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 G6PDP11413 515 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 CCL2P13500 99 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 PTMSP20962 102 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 PAICSP22234 425 aaKnown RBP4.68□□□□□ -1.66
ATXN3-223ENST00000553686 AHCYP23526 432 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 HMOX2P30519 316 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 APLNRP35414 380 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 VEGFCP49767 419 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 AQP5P55064 265 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 ARF6P62330 175 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 RPP30P78346 268 aaKnown RBP4.68□□□□□ -1.66
ATXN3-223ENST00000553686 ARL16Q0P5N6 197 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 PPP1R7Q15435 360 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 XKR7Q5GH72 579 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 GRTP1Q5TC63 336 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 AP1ARQ63HQ0 302 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 TTC27Q6P3X3 843 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 FAM122CQ6P4D5 195 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 EMBQ6PCB8 327 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 CCDC137Q6PK04 289 aaKnown RBP4.68□□□□□ -1.66
ATXN3-223ENST00000553686 PIGWQ7Z7B1 504 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 ZNF584Q8IVC4 421 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 SBSPONQ8IVN8 264 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 C20orf196Q8IYI0 205 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 METTL6Q8TCB7 284 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 KLF14Q8TD94 323 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-223ENST00000553686 C10orf82Q8WW14 230 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 PPCDCQ96CD2 204 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 FAM120BQ96EK7 910 aaKnown RBP4.68□□□□□ -1.66
ATXN3-223ENST00000553686 TECTBQ96PL2 329 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 OR2M2Q96R28 347 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 ULBP2Q9BZM5 246 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 SIRPDQ9H106 197 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 NANSQ9NR45 359 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 MAN2C1Q9NTJ4 1040 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 PPP1R14DQ9NXH3 145 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 TSSC4Q9Y5U2 329 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-223ENST00000553686 SMAD5-AS1Q9Y6J3 95 aa4.68□□□□□ -1.66
ATXN3-223ENST00000553686 A0A0B4J293 547 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 LOC102725191A0A1B0GVB3 256 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 ZNF726A6NNF4 738 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 TSPAN4O14817 238 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 NPFFO15130 113 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 TIMM8AO60220 97 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-223ENST00000553686 ZNF500O60304 480 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-223ENST00000553686 TBX19O60806 448 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 UGT2B17O75795 530 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 OR4F21O95013 312 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 KLHL2O95198 593 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 ECDO95905 644 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-223ENST00000553686 RBP1P09455 135 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 PATE4P0C8F1 98 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 MPV17P39210 176 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 FRKP42685 505 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-223ENST00000553686 CCT3P49368 545 aaKnown RBP4.67□□□□□ -1.66
ATXN3-223ENST00000553686 VAMP2P63027 116 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 KCNJ10P78508 379 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 KCNJ8Q15842 424 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 AANATQ16613 207 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 ZNF404Q494X3 552 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 SLC36A2Q495M3 483 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 CDONQ4KMG0 1287 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 SPRNQ5BIV9 151 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 TEX35Q5T0J7 233 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 METAP1DQ6UB28 335 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-223ENST00000553686 ZNF841Q6ZN19 808 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 CYS1Q717R9 158 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 CMC1Q7Z7K0 106 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 SKA3Q8IX90 412 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 PDZD9Q8IXQ8 264 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 TMEM123Q8N131 208 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 Q8N2B8 174 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 KDM8Q8N371 416 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 FBXO36Q8NEA4 188 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 FAM71CQ8NEG0 241 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 OR2Z1Q8NG97 314 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 OR5AU1Q8NGC0 362 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 OR51D1Q8NGF3 324 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 OR6N1Q8NGY5 312 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 MFSD8Q8NHS3 518 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 SECTM1Q8WVN6 248 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 CIDECQ96AQ7 238 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-223ENST00000553686 TUBGCP3Q96CW5 907 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 TMEM19Q96HH6 336 aa4.67□□□□□ -1.66
ATXN3-223ENST00000553686 NKX3-1Q99801 234 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms