RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 RHBDD1Q8TEB9 315 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 OR5B2Q96R09 309 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 KCNK15Q9H427 330 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 POFUT1Q9H488 388 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 RFPL4AA6NLU0 287 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 TMEM14DPA8MWL7 114 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 RFPL4AL1F8VTS6 287 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 EIF1AYO14602 144 aaKnown RBP11.44□□□□□ -0.58
SHMT2-205ENST00000553474 GOSR2O14653 212 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 CD8AP01732 235 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 PDGFAP04085 211 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 SDHBP21912 280 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 ZNF93P35789 620 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-205ENST00000553474 GUCA1AP43080 201 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-205ENST00000553474 EIF1AXP47813 144 aaKnown RBP11.44□□□□□ -0.58
SHMT2-205ENST00000553474 DUSP3P51452 185 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-205ENST00000553474 ZNF133P52736 654 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-205ENST00000553474 GK2Q14410 553 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-205ENST00000553474 PCOLCEQ15113 449 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 TAF13Q15543 124 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 TOR2AQ5JU69 321 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 LIN54Q6MZP7 749 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 TMPPEQ6ZT21 453 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 DOK3Q7L591 496 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 WDFY1Q8IWB7 410 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 PAQR4Q8N4S7 273 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-205ENST00000553474 OR1J2Q8NGS2 313 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 M1APQ8TC57 530 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 ADAT3Q96EY9 351 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-205ENST00000553474 B3GNT4Q9C0J1 378 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 ZNF700Q9H0M5 742 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 GHRLQ9UBU3 117 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 KCNN3Q9UGI6 736 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 KLK13Q9UKR3 277 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 A0A1B0GTI1 187 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 MEIS3P1A6NDR6 274 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 SULT2B1O00204 365 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 CRYZL1O95825 349 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 GSTP1P09211 210 aaKnown RBP11.44□□□□□ -0.58
SHMT2-205ENST00000553474 ZNF35P13682 527 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 H3F3AP84243 136 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 ACTBL2Q562R1 376 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 TMEM65Q6PI78 240 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 CFAP77Q6ZQR2 320 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 GPAT4Q86UL3 456 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 GALNT16Q8N428 558 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 OR52N4Q8NGI2 321 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 KCNG3Q8TAE7 436 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 SCARB1Q8WTV0 552 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 DVL3Q92997 716 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-205ENST00000553474 INTS12Q96CB8 462 aaKnown RBP11.44□□□□□ -0.58
SHMT2-205ENST00000553474 MESP1Q9BRJ9 268 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 SEC61A2Q9H9S3 476 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 FBXL2Q9UKC9 423 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 NUP50Q9UKX7 468 aa11.44□□□□□ -0.58
SHMT2-205ENST00000553474 PTPRZ1P23471 2315 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-205ENST00000553474 IGHV1-45A0A0A0MS14 117 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 OR14I1A6ND48 311 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 TMEM235A6NFC5 223 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 SHISA8B8ZZ34 492 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 C9J4A7 227 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 APOC1P02654 83 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 CD63P08962 238 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 VSIG8P0DPA2 414 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 CD59P13987 128 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 ZNF17P17021 662 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 DSCR4P56555 118 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-205ENST00000553474 UNC119Q13432 240 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 CCDC157Q569K6 752 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 C10orf128Q5T292 105 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 ATPAF1Q5TC12 328 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-205ENST00000553474 AWAT2Q6E213 333 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 TMUB2Q71RG4 321 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 SLC25A42Q86VD7 318 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 COMMD7Q86VX2 200 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 ACBD4Q8NC06 268 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 AGBL5Q8NDL9 886 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 OR10R2Q8NGX6 335 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 IFI44Q8TCB0 444 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 NTNG2Q96CW9 530 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 C10orf35Q96D05 121 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 ANGPTL4Q9BY76 406 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 TINAGL1Q9GZM7 467 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-205ENST00000553474 CDCP1Q9H5V8 836 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 HRH3Q9Y5N1 445 aa11.43□□□□□ -0.58
SHMT2-205ENST00000553474 A0A0D9SG52 128 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 ARPC5O15511 151 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 DNPH1O43598 174 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 MTRF1O75570 445 aaKnown RBP11.42□□□□□ -0.58
SHMT2-205ENST00000553474 CFDP00746 253 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-205ENST00000553474 QDPRP09417 244 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 ARPC4P59998 168 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 UBE2MP61081 183 aaKnown RBP11.42□□□□□ -0.58
SHMT2-205ENST00000553474 CSNK2A1P68400 391 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-205ENST00000553474 ZNF345Q14585 488 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 HLXQ14774 488 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-205ENST00000553474 PNLIPRP3Q17RR3 467 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 MOGAT2Q3SYC2 334 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 TMEM176BQ3YBM2 270 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-205ENST00000553474 CDNFQ49AH0 187 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms