RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 PALLDQ8WX93 1383 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 DENND4AQ7Z401 1863 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 ATRXP46100 2492 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 TMEM94Q12767 1356 aa3.31□□□□□ -1.88
SCFD1-209ENST00000553280 JCADQ9P266 1359 aa3.31□□□□□ -1.88
SCFD1-209ENST00000553280 IGLV1-50A0A075B6I6 118 aa3.31□□□□□ -1.88
SCFD1-209ENST00000553280 A0A0B4J2E0 115 aa3.31□□□□□ -1.88
SCFD1-209ENST00000553280 VAPBO95292 243 aa3.31□□□□□ -1.88
SCFD1-209ENST00000553280 TLX1NBP0CAT3 122 aa3.31□□□□□ -1.88
SCFD1-209ENST00000553280 PSMC3P17980 439 aa3.31□□□□□ -1.88
SCFD1-209ENST00000553280 NOVP48745 357 aa3.31□□□□□ -1.88
SCFD1-209ENST00000553280 ATP5J2P56134 94 aa3.31□□□□□ -1.88
SCFD1-209ENST00000553280 C2orf83Q53S99 150 aa3.31□□□□□ -1.88
SCFD1-209ENST00000553280 ZNF530Q6P9A1 599 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-209ENST00000553280 TMPRSS11AQ6ZMR5 421 aa3.31□□□□□ -1.88
SCFD1-209ENST00000553280 SNX20Q7Z614 316 aa3.31□□□□□ -1.88
SCFD1-209ENST00000553280 DAW1Q8N136 415 aa3.31□□□□□ -1.88
SCFD1-209ENST00000553280 PIFOQ8TCI5 191 aa3.31□□□□□ -1.88
SCFD1-209ENST00000553280 CACNG8Q8WXS5 425 aa3.31□□□□□ -1.88
SCFD1-209ENST00000553280 TM4SF18Q96CE8 201 aa3.31□□□□□ -1.88
SCFD1-209ENST00000553280 CENPNQ96H22 339 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-209ENST00000553280 CEP170P1Q96L14 293 aa3.31□□□□□ -1.88
SCFD1-209ENST00000553280 BMFQ96LC9 184 aa3.31□□□□□ -1.88
SCFD1-209ENST00000553280 RGS18Q9NS28 235 aa3.31□□□□□ -1.88
SCFD1-209ENST00000553280 CES1P1Q9UKY3 287 aa3.31□□□□□ -1.88
SCFD1-209ENST00000553280 CELA1Q9UNI1 258 aa3.31□□□□□ -1.88
SCFD1-209ENST00000553280 IGKV1-8A0A0C4DH67 115 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 A0A1B0GVX0 72 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 C11orf94C9JXX5 98 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 E7EWF7 191 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 H0Y9J4 135 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 YKT6O15498 198 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 ANGPTL7O43827 346 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 CTNSO60931 367 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 TRAPPC6AO75865 159 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 SLC25A14O95258 325 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-209ENST00000553280 MDKP21741 143 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-209ENST00000553280 HTR1DP28221 377 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 HTR2CP28335 458 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 SSTR5P35346 364 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 GPR4P46093 362 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 UBE2E1P51965 193 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 CDKN2DP55273 166 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 SLC35B1P78383 322 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 IRF4Q15306 451 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 TCEAL5Q5H9L2 206 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 NDUFAF7Q7L592 441 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 RAB43Q86YS6 212 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 C12orf56Q8IXR9 622 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 OTUD6BQ8N6M0 293 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 ZNF433Q8N7K0 673 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-209ENST00000553280 OR10Z1Q8NGY1 313 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 TCEAL3Q969E4 200 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 UBE2E2Q96LR5 201 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 GLT1D1Q96MS3 346 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 OR2A5Q96R48 311 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 TIMM17AQ99595 171 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 CHRNA10Q9GZZ6 450 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 RAB1BQ9H0U4 201 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 TPK1Q9H3S4 243 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 TMEM27Q9HBJ8 222 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 ANKHQ9HCJ1 492 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 RRAGDQ9NQL2 400 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-209ENST00000553280 ZNF331Q9NQX6 463 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-209ENST00000553280 ZNF302Q9NR11 478 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 TREX1Q9NSU2 369 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 ANAPC11Q9NYG5 84 aa3.3□□□□□ -1.88
SCFD1-209ENST00000553280 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-209ENST00000553280 LINC00854A0A1B0GVQ3 168 aa3.29□□□□□ -1.88
SCFD1-209ENST00000553280 DNASE2O00115 360 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-209ENST00000553280 PSG2P11465 335 aa3.29□□□□□ -1.88
SCFD1-209ENST00000553280 IGFBP3P17936 291 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-209ENST00000553280 ZNF133P52736 654 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-209ENST00000553280 TAS2R60P59551 318 aa3.29□□□□□ -1.88
SCFD1-209ENST00000553280 PAFAH1B2P68402 229 aa3.29□□□□□ -1.88
SCFD1-209ENST00000553280 C18orf21Q32NC0 220 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-209ENST00000553280 GPR26Q8NDV2 337 aa3.29□□□□□ -1.88
SCFD1-209ENST00000553280 OR6N2Q8NGY6 317 aa3.29□□□□□ -1.88
SCFD1-209ENST00000553280 OR10G6Q8NH81 332 aa3.29□□□□□ -1.88
SCFD1-209ENST00000553280 ZNF799Q96GE5 643 aa3.29□□□□□ -1.88
SCFD1-209ENST00000553280 HINT2Q9BX68 163 aa3.29□□□□□ -1.88
SCFD1-209ENST00000553280 OSBPL11Q9BXB4 747 aa3.29□□□□□ -1.88
SCFD1-209ENST00000553280 SYT4Q9H2B2 425 aa3.29□□□□□ -1.88
SCFD1-209ENST00000553280 CSNK1G1Q9HCP0 422 aa3.29□□□□□ -1.88
SCFD1-209ENST00000553280 LHX9Q9NQ69 397 aa3.29□□□□□ -1.88
SCFD1-209ENST00000553280 FBXO8Q9NRD0 319 aa3.29□□□□□ -1.88
SCFD1-209ENST00000553280 STMN3Q9NZ72 180 aa3.29□□□□□ -1.88
SCFD1-209ENST00000553280 OR12D3Q9UGF7 316 aa3.29□□□□□ -1.88
SCFD1-209ENST00000553280 ZNF257Q9Y2Q1 563 aa3.29□□□□□ -1.88
SCFD1-209ENST00000553280 OR51B2Q9Y5P1 312 aa3.29□□□□□ -1.88
SCFD1-209ENST00000553280 WSB1Q9Y6I7 421 aa3.29□□□□□ -1.88
SCFD1-209ENST00000553280 V9GYY9 64 aa3.29□□□□□ -1.88
SCFD1-209ENST00000553280 GTF3C1Q12789 2109 aa3.29□□□□□ -1.88
SCFD1-209ENST00000553280 ADAMTS13Q76LX8 1427 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 PIK3R4Q99570 1358 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 A0A096LNJ9 63 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 IGHV1-69DA0A0B4J2H0 117 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 IGHV5-10-1A0A0J9YXX1 117 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 TMX2-CTNND1H3BSU7 103 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 K7ERQ8 282 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms