RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 ZNF121P58317 390 aaPredicted RBP15.7■□□□□ 0.1
PRPF40B-216ENST00000552301 EFNB1P98172 346 aa15.7■□□□□ 0.1
PRPF40B-216ENST00000552301 SLC3A1Q07837 685 aa15.7■□□□□ 0.1
PRPF40B-216ENST00000552301 GLYATL3Q5SZD4 288 aa15.7■□□□□ 0.1
PRPF40B-216ENST00000552301 LRRN1Q6UXK5 716 aa15.7■□□□□ 0.1
PRPF40B-216ENST00000552301 FAM57BQ71RH2 274 aa15.7■□□□□ 0.1
PRPF40B-216ENST00000552301 OR52H1Q8NGJ2 320 aa15.7■□□□□ 0.1
PRPF40B-216ENST00000552301 ASB17Q8WXJ9 295 aa15.7■□□□□ 0.1
PRPF40B-216ENST00000552301 RFKQ969G6 155 aa15.7■□□□□ 0.1
PRPF40B-216ENST00000552301 TIMD4Q96H15 378 aa15.7■□□□□ 0.1
PRPF40B-216ENST00000552301 PGAM5Q96HS1 289 aa15.7■□□□□ 0.1
PRPF40B-216ENST00000552301 HRASLS5Q96KN8 279 aa15.7■□□□□ 0.1
PRPF40B-216ENST00000552301 MNTQ99583 582 aa15.7■□□□□ 0.1
PRPF40B-216ENST00000552301 MROQ9BYG7 248 aa15.7■□□□□ 0.1
PRPF40B-216ENST00000552301 OR10A2Q9H208 303 aa15.7■□□□□ 0.1
PRPF40B-216ENST00000552301 BRD7Q9NPI1 651 aa15.7■□□□□ 0.1
PRPF40B-216ENST00000552301 WARS2Q9UGM6 360 aaKnown RBP15.7■□□□□ 0.1
PRPF40B-216ENST00000552301 KLHDC2Q9Y2U9 406 aa15.7■□□□□ 0.1
PRPF40B-216ENST00000552301 NOP16Q9Y3C1 178 aaKnown RBP15.7■□□□□ 0.1
PRPF40B-216ENST00000552301 HIVEP2P31629 2446 aa15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 ANKRD65E5RJM6 399 aa15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 PHYHO14832 338 aa15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 RP2O75695 350 aa15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 CFL1P23528 166 aaKnown RBP15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 ATP6V1E1P36543 226 aa15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 GZMKP49863 264 aa15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 RIPPLY3P57055 190 aa15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 PSMA6P60900 246 aaKnown RBP15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 ZNF92Q03936 586 aa15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 POU4F2Q12837 409 aa15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 RCN1Q15293 331 aa15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 GFOD2Q3B7J2 385 aa15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 Q6ZR03 302 aa15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 SLC35F2Q8IXU6 374 aa15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 OR10AD1Q8NGE0 317 aa15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 OR51G2Q8NGK0 314 aa15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 TRUB1Q8WWH5 349 aaKnown RBP15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 CCL17Q92583 94 aa15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 TMEM100Q9NV29 134 aa15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 IKZF2Q9UKS7 526 aa15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 GMPPBQ9Y5P6 360 aa15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 VPS13CQ709C8 3753 aa15.69■□□□□ 0.1
PRPF40B-216ENST00000552301 CD300LBA8K4G0 201 aa15.68■□□□□ 0.1
PRPF40B-216ENST00000552301 ZNF670-ZNF695F2Z2N8 137 aa15.68■□□□□ 0.1
PRPF40B-216ENST00000552301 HTR1FP30939 366 aa15.68■□□□□ 0.1
PRPF40B-216ENST00000552301 SRP9P49458 86 aaKnown RBP15.68■□□□□ 0.1
PRPF40B-216ENST00000552301 HCCSP53701 268 aa15.68■□□□□ 0.1
PRPF40B-216ENST00000552301 TRIP10Q15642 601 aa15.68■□□□□ 0.1
PRPF40B-216ENST00000552301 PEG10Q86TG7 708 aaKnown RBP15.68■□□□□ 0.1
PRPF40B-216ENST00000552301 ITLN1Q8WWA0 313 aa15.68■□□□□ 0.1
PRPF40B-216ENST00000552301 REEP6Q96HR9 211 aa15.68■□□□□ 0.1
PRPF40B-216ENST00000552301 OR2V2Q96R30 315 aa15.68■□□□□ 0.1
PRPF40B-216ENST00000552301 SLC29A1Q99808 456 aa15.68■□□□□ 0.1
PRPF40B-216ENST00000552301 SLC30A2Q9BRI3 323 aa15.68■□□□□ 0.1
PRPF40B-216ENST00000552301 TTTY10Q9BZA0 68 aa15.68■□□□□ 0.1
PRPF40B-216ENST00000552301 SLC22A4Q9H015 551 aa15.68■□□□□ 0.1
PRPF40B-216ENST00000552301 NARFLQ9H6Q4 476 aa15.68■□□□□ 0.1
PRPF40B-216ENST00000552301 ADGRL4Q9HBW9 690 aa15.68■□□□□ 0.1
PRPF40B-216ENST00000552301 HAO2Q9NYQ3 351 aa15.68■□□□□ 0.1
PRPF40B-216ENST00000552301 IL19Q9UHD0 177 aa15.68■□□□□ 0.1
PRPF40B-216ENST00000552301 LRP12Q9Y561 859 aa15.68■□□□□ 0.1
PRPF40B-216ENST00000552301 C2CD3Q4AC94 2353 aa15.68■□□□□ 0.1
PRPF40B-216ENST00000552301 LRP5LA4QPB2 252 aa15.67■□□□□ 0.1
PRPF40B-216ENST00000552301 ERICH4A6NGS2 130 aa15.67■□□□□ 0.1
PRPF40B-216ENST00000552301 CD5LO43866 347 aa15.67■□□□□ 0.1
PRPF40B-216ENST00000552301 TACSTD2P09758 323 aa15.67■□□□□ 0.1
PRPF40B-216ENST00000552301 ANPEPP15144 967 aa15.67■□□□□ 0.1
PRPF40B-216ENST00000552301 RIDAP52758 137 aaKnown RBP15.67■□□□□ 0.1
PRPF40B-216ENST00000552301 TMED1Q13445 227 aa15.67■□□□□ 0.1
PRPF40B-216ENST00000552301 CYB5R2Q6BCY4 276 aa15.67■□□□□ 0.1
PRPF40B-216ENST00000552301 DEGS2Q6QHC5 323 aa15.67■□□□□ 0.1
PRPF40B-216ENST00000552301 OR56B2PQ8NGI1 322 aa15.67■□□□□ 0.1
PRPF40B-216ENST00000552301 RAB1CQ92928 201 aa15.67■□□□□ 0.1
PRPF40B-216ENST00000552301 MBOAT4Q96T53 435 aa15.67■□□□□ 0.1
PRPF40B-216ENST00000552301 REPIN1Q9BWE0 567 aaKnown RBP15.67■□□□□ 0.1
PRPF40B-216ENST00000552301 RGCCQ9H4X1 137 aa15.67■□□□□ 0.1
PRPF40B-216ENST00000552301 YAE1D1Q9NRH1 226 aa15.67■□□□□ 0.1
PRPF40B-216ENST00000552301 CLN6Q9NWW5 311 aa15.67■□□□□ 0.1
PRPF40B-216ENST00000552301 TREM2Q9NZC2 230 aa15.67■□□□□ 0.1
PRPF40B-216ENST00000552301 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.67■□□□□ 0.1
PRPF40B-216ENST00000552301 COPS3Q9UNS2 423 aa15.67■□□□□ 0.1
PRPF40B-216ENST00000552301 CACNG2Q9Y698 323 aa15.67■□□□□ 0.1
PRPF40B-216ENST00000552301 C5orf63A6NC05 138 aa15.66■□□□□ 0.1
PRPF40B-216ENST00000552301 SNTNA6NMZ2 147 aa15.66■□□□□ 0.1
PRPF40B-216ENST00000552301 PSMD9O00233 223 aa15.66■□□□□ 0.1
PRPF40B-216ENST00000552301 LILRA1O75019 489 aa15.66■□□□□ 0.1
PRPF40B-216ENST00000552301 ZNF254O75437 659 aa15.66■□□□□ 0.1
PRPF40B-216ENST00000552301 SBK2P0C263 348 aa15.66■□□□□ 0.1
PRPF40B-216ENST00000552301 CXCR4P61073 352 aa15.66■□□□□ 0.1
PRPF40B-216ENST00000552301 KRTAP1-1Q07627 177 aa15.66■□□□□ 0.1
PRPF40B-216ENST00000552301 ZNF829Q3KNS6 432 aaPredicted RBP15.66■□□□□ 0.1
PRPF40B-216ENST00000552301 AVPI1Q5T686 147 aa15.66■□□□□ 0.1
PRPF40B-216ENST00000552301 MEDAGQ5VYS4 303 aa15.66■□□□□ 0.1
PRPF40B-216ENST00000552301 ZNF322Q6U7Q0 402 aaPredicted RBP15.66■□□□□ 0.1
PRPF40B-216ENST00000552301 ZNF679Q8IYX0 411 aa15.66■□□□□ 0.1
PRPF40B-216ENST00000552301 SPSB4Q96A44 273 aa15.66■□□□□ 0.1
PRPF40B-216ENST00000552301 OR8B4Q96RC9 309 aa15.66■□□□□ 0.1
PRPF40B-216ENST00000552301 PPP1R3CQ9UQK1 317 aa15.66■□□□□ 0.1
PRPF40B-216ENST00000552301 ISPDA4D126 451 aa15.65■□□□□ 0.1
PRPF40B-216ENST00000552301 ANKRD30BLA7E2S9 258 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms