RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 CDONQ4KMG0 1287 aa11.71□□□□□ -0.53
CHMP1A-210ENST00000551981 IFI44LQ53G44 452 aa11.71□□□□□ -0.53
CHMP1A-210ENST00000551981 DPY19L2P2Q6ZN68 376 aa11.71□□□□□ -0.53
CHMP1A-210ENST00000551981 PTCHD4Q6ZW05 846 aa11.71□□□□□ -0.53
CHMP1A-210ENST00000551981 VMO1Q7Z5L0 202 aa11.71□□□□□ -0.53
CHMP1A-210ENST00000551981 PDZD9Q8IXQ8 264 aa11.71□□□□□ -0.53
CHMP1A-210ENST00000551981 OR2AJ1Q8NGZ0 328 aa11.71□□□□□ -0.53
CHMP1A-210ENST00000551981 NPRL2Q8WTW4 380 aa11.71□□□□□ -0.53
CHMP1A-210ENST00000551981 ATP6V1G3Q96LB4 118 aa11.71□□□□□ -0.53
CHMP1A-210ENST00000551981 ATF6BQ99941 703 aa11.71□□□□□ -0.53
CHMP1A-210ENST00000551981 RASSF4Q9H2L5 321 aa11.71□□□□□ -0.53
CHMP1A-210ENST00000551981 C1orf123Q9NWV4 160 aa11.71□□□□□ -0.53
CHMP1A-210ENST00000551981 VPREB3Q9UKI3 123 aa11.71□□□□□ -0.53
CHMP1A-210ENST00000551981 SIGLEC7Q9Y286 467 aa11.71□□□□□ -0.53
CHMP1A-210ENST00000551981 IER3IP1Q9Y5U9 82 aa11.71□□□□□ -0.53
CHMP1A-210ENST00000551981 KPTNQ9Y664 436 aa11.71□□□□□ -0.53
CHMP1A-210ENST00000551981 ZNF816-ZNF321PA0A0X1KG74 233 aa11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 A0A1B0GVI7 797 aa11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 DVL1O14640 695 aa11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 OR10H3O60404 316 aa11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 PTP4A3O75365 173 aa11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 TSPAN9O75954 239 aa11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 TXNDC12O95881 172 aa11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 GYPAP02724 150 aa11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 TGFBR2P37173 567 aa11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 MDH1P40925 334 aaKnown RBP11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 CDKN2AP42771 156 aaKnown RBP11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 TPTEP56180 551 aa11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 HOXA4Q00056 320 aaPredicted RBP11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 EGR3Q06889 387 aa11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 TRAP1Q12931 704 aaKnown RBP11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 RSPO1Q2MKA7 263 aaPredicted RBP11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 SLC18B1Q6NT16 456 aa11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 FKBP9P1Q75LS8 142 aa11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 GALNT4Q8N4A0 578 aa11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 PIP4P2Q8N4L2 257 aa11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 SPERTQ8NA61 448 aa11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 ST8SIA4Q92187 359 aa11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 RSRC1Q96IZ7 334 aaKnown RBP11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 TSSK2Q96PF2 358 aa11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 TMEM120AQ9BXJ8 343 aa11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 CNTD2Q9H8S5 307 aa11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 KRCC1Q9NPI7 259 aaPredicted RBP11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 RPUSD1Q9UJJ7 312 aaKnown RBP11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 AP3M1Q9Y2T2 418 aa11.7□□□□□ -0.54
CHMP1A-210ENST00000551981 IGLV1-36A0A0B4J1U3 117 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 hCG_1807616A0A1W2PRN6 198 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 ANKRD61A6NGH8 418 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 GGT3PA6NGU5 568 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 A6NLC8 198 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 CD300LBA8K4G0 201 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 PIN1P1O15428 100 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 PPP1R3DO95685 299 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 EEF1B2P24534 225 aaKnown RBP11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 GGT2P36268 569 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 GUCA2AQ02747 115 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 BEAN1Q3B7T3 259 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 CFAP77Q6ZQR2 320 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 Q6ZTK2 550 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 REC114Q7Z4M0 266 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 LINC00346Q8IVM7 164 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 CMTM4Q8IZR5 234 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 SLC26A10Q8NG04 563 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 OR5R1Q8NH85 324 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 SLC7A13Q8TCU3 470 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 SPTSSAQ969W0 71 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 HSH2DQ96JZ2 352 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 SRA1Q9HD15 236 aaKnown RBP11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 MRPL15Q9P015 296 aaKnown RBP11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 ZNRD1Q9P1U0 126 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 ONECUT1Q9UBC0 465 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 KAAG1Q9UBP8 84 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 B9D1Q9UPM9 204 aa11.69□□□□□ -0.54
CHMP1A-210ENST00000551981 UNC119BA6NIH7 251 aa11.68□□□□□ -0.54
CHMP1A-210ENST00000551981 G3V4G9 280 aa11.68□□□□□ -0.54
CHMP1A-210ENST00000551981 DCTN6O00399 190 aa11.68□□□□□ -0.54
CHMP1A-210ENST00000551981 GSTA4O15217 222 aa11.68□□□□□ -0.54
CHMP1A-210ENST00000551981 EDF1O60869 148 aaKnown RBP11.68□□□□□ -0.54
CHMP1A-210ENST00000551981 PAHP00439 452 aa11.68□□□□□ -0.54
CHMP1A-210ENST00000551981 RENP00797 406 aa11.68□□□□□ -0.54
CHMP1A-210ENST00000551981 H1F0P07305 194 aaKnown RBP11.68□□□□□ -0.54
CHMP1A-210ENST00000551981 GRPP07492 148 aa11.68□□□□□ -0.54
CHMP1A-210ENST00000551981 FGD3Q5JSP0 725 aa11.68□□□□□ -0.54
CHMP1A-210ENST00000551981 KPRPQ5T749 579 aaPredicted RBP11.68□□□□□ -0.54
CHMP1A-210ENST00000551981 SMARCD3Q6STE5 483 aa11.68□□□□□ -0.54
CHMP1A-210ENST00000551981 METAP1DQ6UB28 335 aaPredicted RBP11.68□□□□□ -0.54
CHMP1A-210ENST00000551981 TSEN54Q7Z6J9 526 aaKnown RBP11.68□□□□□ -0.54
CHMP1A-210ENST00000551981 FAM90A1Q86YD7 464 aa11.68□□□□□ -0.54
CHMP1A-210ENST00000551981 OR6V1Q8N148 313 aa11.68□□□□□ -0.54
CHMP1A-210ENST00000551981 C14orf119Q9NWQ9 140 aa11.68□□□□□ -0.54
CHMP1A-210ENST00000551981 CYB5R1Q9UHQ9 305 aa11.68□□□□□ -0.54
CHMP1A-210ENST00000551981 A0A1W2PRQ8 180 aa11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 M0R135 149 aa11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 CXCR6O00574 342 aa11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 PLXNB1O43157 2135 aa11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 HLA-DQA2P01906 255 aa11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 OPN1MWP04001 364 aa11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 OPN1MW2P0DN77 364 aa11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 OPN1MW3P0DN78 364 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms