RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 MYBPC1Q00872 1141 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 FAM27E3Q08E93 113 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 KRR1Q13601 381 aaKnown RBP5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 MELKQ14680 651 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 GINS1Q14691 196 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 STK11Q15831 433 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 SNCBQ16143 134 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 HIST3H3Q16695 136 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 PGGHGQ32M88 737 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 MESTQ5EB52 335 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 CLEC12AQ5QGZ9 265 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 SLX4IPQ5VYV7 408 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 C12orf73Q69YU5 71 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 ACSM5Q6NUN0 579 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 NIPAL3Q6P499 406 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 CASP12Q6UXS9 341 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 AAED1Q7RTV5 226 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 NUFIP2Q7Z417 695 aaKnown RBP5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 ADCK1Q86TW2 530 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 WDFY1Q8IWB7 410 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 C20orf196Q8IYI0 205 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 GCNT2Q8N0V5 402 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 ZNF611Q8N823 705 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 POMGNT2Q8NAT1 580 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 OR4Q3Q8NH05 313 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 TMEM54Q969K7 222 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 ZNF566Q969W8 418 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 APH1AQ96BI3 265 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 MSI2Q96DH6 328 aaKnown RBP5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 TXNDC15Q96J42 360 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 ERMAPQ96PL5 475 aaPredicted RBP5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 MBOAT4Q96T53 435 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 DDOQ99489 341 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 ALG12Q9BV10 488 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 EMC6Q9BV81 110 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 IFT27Q9BW83 186 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 TEX12Q9BXU0 123 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 PRRG3Q9BZD7 231 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 PIGMQ9H3S5 423 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 RIBC2Q9H4K1 309 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 CMC2Q9NRP2 79 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 FAM118AQ9NWS6 357 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 MALT1Q9UDY8 824 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 KLHL21Q9UJP4 597 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 CLEC4AQ9UMR7 237 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 IER3IP1Q9Y5U9 82 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 HECTD4Q9Y4D8 3996 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 ABCA13Q86UQ4 5058 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 TEX13CA0A0J9YWL9 993 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 LOC100130705A0A1B0GUX0 176 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 SLC22A23A1A5C7 686 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 PRSS37A4D1T9 235 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 A8MXE2 369 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 RPL36A-HNRNPH2H7BZ11 118 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 XKRYO14609 159 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 HS3ST1O14792 307 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 SERPINI2O75830 405 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 IFNGP01579 166 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 DANCRP0C864 163 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 NR2C1P13056 603 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 HIST1H1CP16403 213 aaKnown RBP5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 ZNF3P17036 446 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 GGT2P36268 569 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 POLR2IP36954 125 aaKnown RBP5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 CDKN2AP42771 156 aaKnown RBP5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 NR4A2P43354 598 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 HSPA13P48723 471 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 SIRPAP78324 504 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 ADARB1P78563 741 aaKnown RBP5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 ITGADQ13349 1161 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 IL18R1Q13478 541 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 CAMK2DQ13557 499 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 CNN3Q15417 329 aaKnown RBP5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 THEM4Q5T1C6 240 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 PXDC1Q5TGL8 231 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 TSPO2Q5TGU0 170 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 TMEM236Q5W0B7 351 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 TTC23Q5W5X9 447 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 FBXW9Q5XUX1 488 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 FAM166AQ6J272 317 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 TFAP2EQ6VUC0 442 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 ZNF704Q6ZNC4 412 aaPredicted RBP5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 Q6ZT83 130 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 ABHD12BQ7Z5M8 362 aaPredicted RBP5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 ZNF100Q8IYN0 542 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 DHRSXQ8N5I4 330 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 IQCF1Q8N6M8 205 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 CNEP1R1Q8N9A8 125 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 NPEPL1Q8NDH3 523 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 ZNF555Q8NEP9 628 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 NOXO1Q8NFA2 376 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 OR52E2Q8NGJ4 325 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 LILRB1Q8NHL6 650 aaPredicted RBP5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 TRUB1Q8WWH5 349 aaKnown RBP5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 HDAC2Q92769 488 aaKnown RBP5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 RASD2Q96D21 266 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 RBMXL1Q96E39 390 aaKnown RBP5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 SLC38A2Q96QD8 506 aa5.54□□□□□ -1.52
DEPDC4-210ENST00000551642 PITX2Q99697 317 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms