RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 ECH1Q13011 328 aa10.62□□□□□ -0.71
SNRPF-203ENST00000551316 GK2Q14410 553 aaPredicted RBP10.62□□□□□ -0.71
SNRPF-203ENST00000551316 OR8G1Q15617 311 aa10.62□□□□□ -0.71
SNRPF-203ENST00000551316 STUMQ69YW2 141 aa10.62□□□□□ -0.71
SNRPF-203ENST00000551316 C11orf53Q8IXP5 236 aa10.62□□□□□ -0.71
SNRPF-203ENST00000551316 C11orf42Q8N5U0 333 aa10.62□□□□□ -0.71
SNRPF-203ENST00000551316 CCDC63Q8NA47 563 aa10.62□□□□□ -0.71
SNRPF-203ENST00000551316 RPS4Y2Q8TD47 263 aa10.62□□□□□ -0.71
SNRPF-203ENST00000551316 ACMSDQ8TDX5 336 aa10.62□□□□□ -0.71
SNRPF-203ENST00000551316 GAFA1Q96PS6 74 aa10.62□□□□□ -0.71
SNRPF-203ENST00000551316 ARMC7Q9H6L4 198 aa10.62□□□□□ -0.71
SNRPF-203ENST00000551316 MEPEQ9NQ76 525 aaPredicted RBP10.62□□□□□ -0.71
SNRPF-203ENST00000551316 A6NLC8 198 aa10.61□□□□□ -0.71
SNRPF-203ENST00000551316 C12orf71A8MTZ7 269 aa10.61□□□□□ -0.71
SNRPF-203ENST00000551316 NUDT19A8MXV4 375 aa10.61□□□□□ -0.71
SNRPF-203ENST00000551316 M0R3H8 397 aa10.61□□□□□ -0.71
SNRPF-203ENST00000551316 NDUFB3O43676 98 aa10.61□□□□□ -0.71
SNRPF-203ENST00000551316 FMO6PO60774 539 aa10.61□□□□□ -0.71
SNRPF-203ENST00000551316 AMY1AP04745 511 aa10.61□□□□□ -0.71
SNRPF-203ENST00000551316 AMY2AP04746 511 aa10.61□□□□□ -0.71
SNRPF-203ENST00000551316 FAM153BP0C7A2 387 aa10.61□□□□□ -0.71
SNRPF-203ENST00000551316 S100A3P33764 101 aa10.61□□□□□ -0.71
SNRPF-203ENST00000551316 PAFAH1B1P43034 410 aa10.61□□□□□ -0.71
SNRPF-203ENST00000551316 CSNK2BP67870 215 aa10.61□□□□□ -0.71
SNRPF-203ENST00000551316 TXNL4AP83876 142 aaKnown RBP10.61□□□□□ -0.71
SNRPF-203ENST00000551316 SELPLGQ14242 412 aa10.61□□□□□ -0.71
SNRPF-203ENST00000551316 RSPO1Q2MKA7 263 aaPredicted RBP10.61□□□□□ -0.71
SNRPF-203ENST00000551316 LRRC29Q8WV35 223 aa10.61□□□□□ -0.71
SNRPF-203ENST00000551316 COG8Q96MW5 612 aa10.61□□□□□ -0.71
SNRPF-203ENST00000551316 RAB17Q9H0T7 212 aa10.61□□□□□ -0.71
SNRPF-203ENST00000551316 BCL2L10Q9HD36 194 aa10.61□□□□□ -0.71
SNRPF-203ENST00000551316 INIPQ9NRY2 104 aa10.61□□□□□ -0.71
SNRPF-203ENST00000551316 SNTG1Q9NSN8 517 aa10.61□□□□□ -0.71
SNRPF-203ENST00000551316 KIAA1456Q9P272 454 aa10.61□□□□□ -0.71
SNRPF-203ENST00000551316 DCDC2Q9UHG0 476 aa10.61□□□□□ -0.71
SNRPF-203ENST00000551316 H0YAE9 185 aa10.6□□□□□ -0.71
SNRPF-203ENST00000551316 ALDOCP09972 364 aaKnown RBP10.6□□□□□ -0.71
SNRPF-203ENST00000551316 ECHS1P30084 290 aa10.6□□□□□ -0.71
SNRPF-203ENST00000551316 DAP3P51398 398 aaKnown RBP10.6□□□□□ -0.71
SNRPF-203ENST00000551316 GMFBP60983 142 aa10.6□□□□□ -0.71
SNRPF-203ENST00000551316 NCALDP61601 193 aa10.6□□□□□ -0.71
SNRPF-203ENST00000551316 UFM1P61960 85 aa10.6□□□□□ -0.71
SNRPF-203ENST00000551316 SCRN3Q0VDG4 424 aa10.6□□□□□ -0.71
SNRPF-203ENST00000551316 SSX2Q16385 188 aa10.6□□□□□ -0.71
SNRPF-203ENST00000551316 ABCA11PQ4W5N1 156 aa10.6□□□□□ -0.71
SNRPF-203ENST00000551316 DHRS4L2Q6PKH6 230 aa10.6□□□□□ -0.71
SNRPF-203ENST00000551316 SYT9Q86SS6 491 aa10.6□□□□□ -0.71
SNRPF-203ENST00000551316 OR1F12Q8NHA8 337 aa10.6□□□□□ -0.71
SNRPF-203ENST00000551316 PFN4Q8NHR9 129 aa10.6□□□□□ -0.71
SNRPF-203ENST00000551316 BCAS4Q8TDM0 211 aa10.6□□□□□ -0.71
SNRPF-203ENST00000551316 APOBEC3DQ96AK3 386 aaPredicted RBP10.6□□□□□ -0.71
SNRPF-203ENST00000551316 AKTIPQ9H8T0 292 aa10.6□□□□□ -0.71
SNRPF-203ENST00000551316 TMEM27Q9HBJ8 222 aa10.6□□□□□ -0.71
SNRPF-203ENST00000551316 RETNQ9HD89 108 aa10.6□□□□□ -0.71
SNRPF-203ENST00000551316 C19orf12Q9NSK7 152 aa10.6□□□□□ -0.71
SNRPF-203ENST00000551316 SELENONQ9NZV5 590 aa10.6□□□□□ -0.71
SNRPF-203ENST00000551316 DSCAML1Q8TD84 2053 aa10.59□□□□□ -0.71
SNRPF-203ENST00000551316 A0A087WUV0 522 aaPredicted RBP10.59□□□□□ -0.71
SNRPF-203ENST00000551316 CPSF4LA6NMK7 179 aaKnown RBP10.59□□□□□ -0.71
SNRPF-203ENST00000551316 RER1O15258 196 aa10.59□□□□□ -0.71
SNRPF-203ENST00000551316 CHP2O43745 196 aa10.59□□□□□ -0.71
SNRPF-203ENST00000551316 CD24P25063 80 aa10.59□□□□□ -0.71
SNRPF-203ENST00000551316 ALDH3A1P30838 453 aa10.59□□□□□ -0.71
SNRPF-203ENST00000551316 WDR4P57081 412 aaKnown RBP10.59□□□□□ -0.71
SNRPF-203ENST00000551316 CCDC153Q494R4 210 aa10.59□□□□□ -0.71
SNRPF-203ENST00000551316 SWT1Q5T5J6 900 aaKnown RBP10.59□□□□□ -0.71
SNRPF-203ENST00000551316 ZNF782Q6ZMW2 699 aaPredicted RBP10.59□□□□□ -0.71
SNRPF-203ENST00000551316 SLC36A1Q7Z2H8 476 aa10.59□□□□□ -0.71
SNRPF-203ENST00000551316 NAA40Q86UY6 237 aa10.59□□□□□ -0.71
SNRPF-203ENST00000551316 RBM45Q8IUH3 476 aaKnown RBP10.59□□□□□ -0.71
SNRPF-203ENST00000551316 OSR2Q8N2R0 312 aa10.59□□□□□ -0.71
SNRPF-203ENST00000551316 TRIML2Q8N7C3 387 aa10.59□□□□□ -0.71
SNRPF-203ENST00000551316 OR4D11Q8NGI4 311 aa10.59□□□□□ -0.71
SNRPF-203ENST00000551316 BBS10Q8TAM1 723 aa10.59□□□□□ -0.71
SNRPF-203ENST00000551316 LRRC8CQ8TDW0 803 aa10.59□□□□□ -0.71
SNRPF-203ENST00000551316 ZNF426Q9BUY5 554 aa10.59□□□□□ -0.71
SNRPF-203ENST00000551316 WDR13Q9H1Z4 485 aa10.59□□□□□ -0.71
SNRPF-203ENST00000551316 EVA1AQ9H8M9 152 aa10.59□□□□□ -0.71
SNRPF-203ENST00000551316 J3QW42 95 aa10.58□□□□□ -0.72
SNRPF-203ENST00000551316 TRIM13O60858 407 aa10.58□□□□□ -0.72
SNRPF-203ENST00000551316 KRT75O95678 551 aa10.58□□□□□ -0.72
SNRPF-203ENST00000551316 GSK3BP49841 420 aa10.58□□□□□ -0.72
SNRPF-203ENST00000551316 ZNF260Q3ZCT1 412 aa10.58□□□□□ -0.72
SNRPF-203ENST00000551316 LRRC10Q5BKY1 277 aa10.58□□□□□ -0.72
SNRPF-203ENST00000551316 FAM185AQ8N0U4 392 aa10.58□□□□□ -0.72
SNRPF-203ENST00000551316 OR5D13Q8NGL4 314 aa10.58□□□□□ -0.72
SNRPF-203ENST00000551316 NFKBIDQ8NI38 313 aa10.58□□□□□ -0.72
SNRPF-203ENST00000551316 SLCO4A1Q96BD0 722 aa10.58□□□□□ -0.72
SNRPF-203ENST00000551316 PRSS27Q9BQR3 290 aa10.58□□□□□ -0.72
SNRPF-203ENST00000551316 PPP1R3EQ9H7J1 279 aa10.58□□□□□ -0.72
SNRPF-203ENST00000551316 TPT1P8Q9HAU6 139 aa10.58□□□□□ -0.72
SNRPF-203ENST00000551316 CACYBPQ9HB71 228 aaKnown RBP10.58□□□□□ -0.72
SNRPF-203ENST00000551316 ABCB10Q9NRK6 738 aa10.58□□□□□ -0.72
SNRPF-203ENST00000551316 SLC25A10Q9UBX3 287 aaPredicted RBP10.58□□□□□ -0.72
SNRPF-203ENST00000551316 ZNF391Q9UJN7 358 aa10.58□□□□□ -0.72
SNRPF-203ENST00000551316 PITPNC1Q9UKF7 332 aa10.58□□□□□ -0.72
SNRPF-203ENST00000551316 PSMB11A5LHX3 300 aa10.57□□□□□ -0.72
SNRPF-203ENST00000551316 ODF3BA8MYP8 253 aa10.57□□□□□ -0.72
SNRPF-203ENST00000551316 GOLGA6L6A8MZA4 724 aa10.57□□□□□ -0.72
SNRPF-203ENST00000551316 CCL24O00175 119 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms