RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 ANOS1P23352 680 aa13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 DCTDP32321 178 aa13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 LIPAP38571 399 aa13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 ZNF81P51508 661 aa13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 PRSS12P56730 875 aa13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 ZNF92Q03936 586 aa13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 EGR3Q06889 387 aa13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 GK2Q14410 553 aaPredicted RBP13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 TESK1Q15569 626 aa13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 GLYATL3Q5SZD4 288 aa13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 C6orf52Q5T4I8 152 aa13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 PRSS57Q6UWY2 283 aa13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 SPNS3Q6ZMD2 512 aa13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 PGAP1Q75T13 922 aa13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 SSX6Q7RTT6 188 aa13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 PRSS45Q7RTY3 260 aa13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 OR5AS1Q8N127 324 aa13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 YIPF7Q8N8F6 280 aa13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 OR52H1Q8NGJ2 320 aa13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 OR2AE1Q8NHA4 323 aa13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 NEU4Q8WWR8 484 aaPredicted RBP13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 GTF3AQ92664 365 aaKnown RBP13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 OR10A2Q9H208 303 aa13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 CYSLTR2Q9NS75 346 aa13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 MRM2Q9UI43 246 aaKnown RBP13.86□□□□□ -0.19
CHMP1A-209ENST00000550872 TMEM269A0A1B0GVZ9 245 aa13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 C17orf100A8MU93 164 aa13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 LY6HO94772 140 aa13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 FADS2O95864 444 aaKnown RBP13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 KRT8P05787 483 aa13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 SELEP16581 610 aa13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 MMP15P51511 669 aa13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 PSMA6P60900 246 aaKnown RBP13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 ACTC1P68032 377 aa13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 ACTA1P68133 377 aa13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 ZNF85Q03923 595 aa13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 CDK5R2Q13319 367 aa13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 TIGD6Q17RP2 521 aa13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 ZNF829Q3KNS6 432 aaPredicted RBP13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 KLHL22Q53GT1 634 aa13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 IZUMO2Q6UXV1 221 aa13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 PLEKHG7Q6ZR37 379 aa13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 THAP5Q7Z6K1 395 aa13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 ACBD7Q8N6N7 88 aa13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 SGK3Q96BR1 496 aa13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 MSL2Q9HCI7 577 aa13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 ZNF319Q9P2F9 582 aa13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 CGGBP1Q9UFW8 167 aaPredicted RBP13.85□□□□□ -0.19
CHMP1A-209ENST00000550872 GGT3PA6NGU5 568 aa13.84□□□□□ -0.19
CHMP1A-209ENST00000550872 METTL15A6NJ78 407 aa13.84□□□□□ -0.19
CHMP1A-209ENST00000550872 ZSCAN5BA6NJL1 495 aa13.84□□□□□ -0.19
CHMP1A-209ENST00000550872 ACOD1A6NK06 481 aa13.84□□□□□ -0.19
CHMP1A-209ENST00000550872 J3QRE1 110 aa13.84□□□□□ -0.19
CHMP1A-209ENST00000550872 SPRY3O43610 288 aa13.84□□□□□ -0.19
CHMP1A-209ENST00000550872 VHLP40337 213 aa13.84□□□□□ -0.19
CHMP1A-209ENST00000550872 RAB40BQ12829 278 aa13.84□□□□□ -0.19
CHMP1A-209ENST00000550872 TSTQ16762 297 aaKnown RBP13.84□□□□□ -0.19
CHMP1A-209ENST00000550872 GFOD2Q3B7J2 385 aa13.84□□□□□ -0.19
CHMP1A-209ENST00000550872 ZMAT1Q5H9K5 638 aa13.84□□□□□ -0.19
CHMP1A-209ENST00000550872 KRTAP1-3Q8IUG1 177 aa13.84□□□□□ -0.19
CHMP1A-209ENST00000550872 WFDC11Q8NEX6 87 aa13.84□□□□□ -0.19
CHMP1A-209ENST00000550872 OR8G5Q8NG78 346 aa13.84□□□□□ -0.19
CHMP1A-209ENST00000550872 SPRYD4Q8WW59 207 aaPredicted RBP13.84□□□□□ -0.19
CHMP1A-209ENST00000550872 REEP6Q96HR9 211 aa13.84□□□□□ -0.19
CHMP1A-209ENST00000550872 REPIN1Q9BWE0 567 aaKnown RBP13.84□□□□□ -0.19
CHMP1A-209ENST00000550872 MRPS18AQ9NVS2 196 aaKnown RBP13.84□□□□□ -0.19
CHMP1A-209ENST00000550872 FAM206AQ9NX38 181 aa13.84□□□□□ -0.19
CHMP1A-209ENST00000550872 GTF2A1LQ9UNN4 478 aa13.84□□□□□ -0.19
CHMP1A-209ENST00000550872 MYRFQ9Y2G1 1151 aa13.84□□□□□ -0.19
CHMP1A-209ENST00000550872 IQCF6A8MYZ5 107 aa13.83□□□□□ -0.2
CHMP1A-209ENST00000550872 TPD52L2O43399 206 aaKnown RBP13.83□□□□□ -0.2
CHMP1A-209ENST00000550872 SULT1C4O75897 302 aa13.83□□□□□ -0.2
CHMP1A-209ENST00000550872 RPP14O95059 124 aaKnown RBP13.83□□□□□ -0.2
CHMP1A-209ENST00000550872 MAGEB1P43366 347 aa13.83□□□□□ -0.2
CHMP1A-209ENST00000550872 HSPA13P48723 471 aa13.83□□□□□ -0.2
CHMP1A-209ENST00000550872 CLEC12BQ2HXU8 276 aa13.83□□□□□ -0.2
CHMP1A-209ENST00000550872 PCGF3Q3KNV8 242 aa13.83□□□□□ -0.2
CHMP1A-209ENST00000550872 TP53I3Q53FA7 332 aa13.83□□□□□ -0.2
CHMP1A-209ENST00000550872 ZNF684Q5T5D7 378 aa13.83□□□□□ -0.2
CHMP1A-209ENST00000550872 FAM220AQ7Z4H9 259 aa13.83□□□□□ -0.2
CHMP1A-209ENST00000550872 BHLHE23Q8NDY6 225 aa13.83□□□□□ -0.2
CHMP1A-209ENST00000550872 OR8B12Q8NGG6 310 aa13.83□□□□□ -0.2
CHMP1A-209ENST00000550872 OR52I1Q8NGK6 324 aa13.83□□□□□ -0.2
CHMP1A-209ENST00000550872 SPSB4Q96A44 273 aa13.83□□□□□ -0.2
CHMP1A-209ENST00000550872 PBOV1Q9GZY1 135 aa13.83□□□□□ -0.2
CHMP1A-209ENST00000550872 OPA3Q9H6K4 179 aa13.83□□□□□ -0.2
CHMP1A-209ENST00000550872 NKIRAS2Q9NYR9 191 aa13.83□□□□□ -0.2
CHMP1A-209ENST00000550872 CD300LBA8K4G0 201 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 LOC110117498-PIK3R3F6TDL0 507 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 PNPP00491 289 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 IGHV1-46P01743 117 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 HPXP02790 462 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 CFL1P23528 166 aaKnown RBP13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 MMP16P51512 607 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 CCL8P80075 99 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 MFGE8Q08431 387 aaPredicted RBP13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 CARTPTQ16568 116 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 LIPNQ5VXI9 398 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 CLEC2AQ6UVW9 174 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 Q6ZR03 302 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms