RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 HIF1ANQ9NWT6 349 aa8.24□□□□□ -1.09
HDAC7-229ENST00000549883 TVP23BQ9NYZ1 205 aa8.24□□□□□ -1.09
HDAC7-229ENST00000549883 UBAP1Q9NZ09 502 aa8.24□□□□□ -1.09
HDAC7-229ENST00000549883 DNAJC27Q9NZQ0 273 aa8.24□□□□□ -1.09
HDAC7-229ENST00000549883 TMEFF2Q9UIK5 374 aaPredicted RBP8.24□□□□□ -1.09
HDAC7-229ENST00000549883 AP4S1Q9Y587 144 aa8.24□□□□□ -1.09
HDAC7-229ENST00000549883 NPTNQ9Y639 398 aa8.24□□□□□ -1.09
HDAC7-229ENST00000549883 SVEP1Q4LDE5 3571 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 A0A1B0GWJ7 208 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 CD300LBA8K4G0 201 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 ZNF878C9JN71 531 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 G3V2T6 193 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 TMEM178BH3BS89 294 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 PSMD9O00233 223 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 ATP5HO75947 161 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 MRPL3P09001 348 aaKnown RBP8.23□□□□□ -1.09
HDAC7-229ENST00000549883 CA6P23280 308 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 ZFP36P26651 326 aaKnown RBP8.23□□□□□ -1.09
HDAC7-229ENST00000549883 OPRL1P41146 370 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 CX3CR1P49238 355 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 APOFQ13790 326 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 PTGES3Q15185 160 aaKnown RBP8.23□□□□□ -1.09
HDAC7-229ENST00000549883 TAF13Q15543 124 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 MPPED2Q15777 294 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 SNAPC1Q16533 368 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 PRAMEF6Q5VXH4 476 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 DRAM2Q6UX65 266 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 PGAP1Q75T13 922 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 CXXC5Q7LFL8 322 aaKnown RBP8.23□□□□□ -1.09
HDAC7-229ENST00000549883 MRPL21Q7Z2W9 205 aaKnown RBP8.23□□□□□ -1.09
HDAC7-229ENST00000549883 MOGAT3Q86VF5 341 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 RFLNBQ8N5W9 214 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 C19orf18Q8NEA5 215 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 OR13G1Q8NGZ3 307 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 THEM6Q8WUY1 208 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 RNF133Q8WVZ7 376 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 PYDC1Q8WXC3 89 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 RAB1CQ92928 201 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 TMEM186Q96B77 213 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 SGK3Q96BR1 496 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 DUS3LQ96G46 650 aaKnown RBP8.23□□□□□ -1.09
HDAC7-229ENST00000549883 GAL3ST1Q99999 423 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 REPIN1Q9BWE0 567 aaKnown RBP8.23□□□□□ -1.09
HDAC7-229ENST00000549883 TTTY10Q9BZA0 68 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 BRD7Q9NPI1 651 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 TMEM100Q9NV29 134 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 KIF17Q9P2E2 1029 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 IL19Q9UHD0 177 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 PPP1R3CQ9UQK1 317 aa8.23□□□□□ -1.09
HDAC7-229ENST00000549883 ATRQ13535 2644 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 SAC3D1A6NKF1 404 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 C3orf80F5H4A9 247 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 H3BNX3 289 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 MAGEB4O15481 346 aaPredicted RBP8.22□□□□□ -1.09
HDAC7-229ENST00000549883 TBX1O43435 398 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 HMGN1P05114 100 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 ANXA2P07355 339 aaKnown RBP8.22□□□□□ -1.09
HDAC7-229ENST00000549883 HOXB6P17509 224 aaKnown RBP8.22□□□□□ -1.09
HDAC7-229ENST00000549883 SRD5A1P18405 259 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 PAICSP22234 425 aaKnown RBP8.22□□□□□ -1.09
HDAC7-229ENST00000549883 TNFSF4P23510 183 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 FASP25445 335 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 RASSF2P50749 326 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 ZNF121P58317 390 aaPredicted RBP8.22□□□□□ -1.09
HDAC7-229ENST00000549883 RPS7P62081 194 aaKnown RBP8.22□□□□□ -1.09
HDAC7-229ENST00000549883 LCN2P80188 198 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 EFNB1P98172 346 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 KPNB1Q14974 876 aaKnown RBP8.22□□□□□ -1.09
HDAC7-229ENST00000549883 KDM4DQ6B0I6 523 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 LRRN1Q6UXK5 716 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 FAM57BQ71RH2 274 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 GLCCI1Q86VQ1 547 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 PARP8Q8N3A8 854 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 OR56B2PQ8NGI1 322 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 OTOSQ8NHW6 89 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 SPRYD4Q8WW59 207 aaPredicted RBP8.22□□□□□ -1.09
HDAC7-229ENST00000549883 TIMD4Q96H15 378 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 PLEKHA8Q96JA3 519 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 CIB1Q99828 191 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 PKP2Q99959 881 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 MMADHCQ9H3L0 296 aaPredicted RBP8.22□□□□□ -1.09
HDAC7-229ENST00000549883 G6PC2Q9NQR9 355 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 UFSP2Q9NUQ7 469 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 COPS3Q9UNS2 423 aa8.22□□□□□ -1.09
HDAC7-229ENST00000549883 LOC105371242A0A075B767 164 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 GGT3PA6NGU5 568 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 ZAR1LA6NP61 321 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 PHF1O43189 567 aaPredicted RBP8.21□□□□□ -1.1
HDAC7-229ENST00000549883 PRODHO43272 600 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 ADRA2CP18825 462 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 TNFRSF1AP19438 455 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 BLVRAP53004 296 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 RAD23AP54725 363 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 BTG1P62324 171 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 GRB2P62993 217 aaKnown RBP8.21□□□□□ -1.1
HDAC7-229ENST00000549883 FAM3AP98173 230 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 MALLQ13021 153 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 GFOD2Q3B7J2 385 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 SLX4IPQ5VYV7 408 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 C12orf73Q69YU5 71 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms