RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 KIR3DL2P43630 455 aa17.42■□□□□ 0.38
CTDSP2-204ENST00000548823 EVX1P49640 407 aa17.42■□□□□ 0.38
CTDSP2-204ENST00000548823 FOXF2Q12947 444 aa17.42■□□□□ 0.38
CTDSP2-204ENST00000548823 CEP78Q5JTW2 689 aa17.42■□□□□ 0.38
CTDSP2-204ENST00000548823 DCXRQ7Z4W1 244 aa17.42■□□□□ 0.38
CTDSP2-204ENST00000548823 CATSPERDQ86XM0 798 aa17.42■□□□□ 0.38
CTDSP2-204ENST00000548823 PRSS35Q8N3Z0 413 aa17.42■□□□□ 0.38
CTDSP2-204ENST00000548823 GDPD1Q8N9F7 314 aa17.42■□□□□ 0.38
CTDSP2-204ENST00000548823 OR2M2Q96R28 347 aa17.42■□□□□ 0.38
CTDSP2-204ENST00000548823 SRXN1Q9BYN0 137 aa17.42■□□□□ 0.38
CTDSP2-204ENST00000548823 SRRQ9GZT4 340 aa17.42■□□□□ 0.38
CTDSP2-204ENST00000548823 NOX4Q9NPH5 578 aa17.42■□□□□ 0.38
CTDSP2-204ENST00000548823 TIGARQ9NQ88 270 aa17.42■□□□□ 0.38
CTDSP2-204ENST00000548823 TBCCD1Q9NVR7 557 aa17.42■□□□□ 0.38
CTDSP2-204ENST00000548823 ABRACLQ9P1F3 81 aa17.42■□□□□ 0.38
CTDSP2-204ENST00000548823 COMMD3Q9UBI1 195 aa17.42■□□□□ 0.38
CTDSP2-204ENST00000548823 LRP12Q9Y561 859 aa17.42■□□□□ 0.38
CTDSP2-204ENST00000548823 USF3Q68DE3 2245 aa17.42■□□□□ 0.38
CTDSP2-204ENST00000548823 SMIM30A4D0T7 59 aa17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 FABP12A6NFH5 140 aa17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 TBX1O43435 398 aa17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 QDPRP09417 244 aa17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 CLDN20P56880 219 aa17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 LSM6P62312 80 aaKnown RBP17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 ZNF79Q15937 498 aa17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 CHRFAM7AQ494W8 412 aa17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 WDR38Q5JTN6 314 aa17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 ABLIM2Q6H8Q1 611 aa17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 LRFN4Q6PJG9 635 aa17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 TMEM123Q8N131 208 aa17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 ZNF676Q8N7Q3 588 aa17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 ZIC4Q8N9L1 334 aa17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 IGFBPL1Q8WX77 278 aa17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 CPNE4Q96A23 557 aaPredicted RBP17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 WDYHV1Q96HA8 205 aa17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 CMTM3Q96MX0 182 aa17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 ZFP3Q96NJ6 502 aa17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 MRI1Q9BV20 369 aa17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 PIGMQ9H3S5 423 aa17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 C1orf198Q9H425 327 aa17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 ZNF701Q9NV72 531 aaPredicted RBP17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 DAPK2Q9UIK4 370 aa17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 R4GMQ9 66 aa17.41■□□□□ 0.38
CTDSP2-204ENST00000548823 EIF1AYO14602 144 aaKnown RBP17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 CSNK1A1P48729 337 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 BCL2A1Q16548 175 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 TRIM16LQ309B1 348 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 IDNKQ5T6J7 187 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 STEAP3Q658P3 488 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 LRRC28Q86X40 367 aaPredicted RBP17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 MAPK1IP1LQ8NDC0 245 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 IL17RDQ8NFM7 739 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 WFIKKN1Q96NZ8 548 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 UCN2Q96RP3 112 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 SLITRK2Q9H156 845 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 NIPAL2Q9H841 368 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 SP140LQ9H930 580 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 ABCB10Q9NRK6 738 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 FAIMQ9NVQ4 179 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 A0A1W2PPL8 197 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 A8MXE2 369 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 CD5LO43866 347 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 HPGDSO60760 199 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 ISG15P05161 165 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 CRYGSP22914 178 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 MMP16P51512 607 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 FAM131AQ6UXB0 335 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 SETD6Q8TBK2 473 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 POLE4Q9NR33 117 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 YAE1D1Q9NRH1 226 aa17.4■□□□□ 0.38
CTDSP2-204ENST00000548823 CR1P17927 2039 aa17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 ZNF716A6NP11 495 aa17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 RNF223E7ERA6 249 aa17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 PNPP00491 289 aa17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 H2BFMP0C1H6 154 aa17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 OCM2P0CE71 109 aa17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 OCMP0CE72 109 aaPredicted RBP17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 PSMD7P51665 324 aa17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 OR10A3P58181 314 aa17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 DEFA1P59665 94 aa17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 DEFA3P59666 94 aa17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 KRTAP24-1Q3LI83 254 aa17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 OR7E24Q6IFN5 339 aa17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 CNIH2Q6PI25 160 aa17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 C20orf196Q8IYI0 205 aa17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 OR6N1Q8NGY5 312 aa17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 OR2AJ1Q8NGZ0 328 aa17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 OR10D3Q8NH80 312 aa17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 TMEM171Q8WVE6 324 aa17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 SLAMF6Q96DU3 332 aa17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 ZNF385AQ96PM9 386 aaKnown RBP17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 PPP1R3EQ9H7J1 279 aa17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 CYSLTR2Q9NS75 346 aa17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 PAQR5Q9NXK6 330 aaPredicted RBP17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 FLVCR1Q9Y5Y0 555 aa17.39■□□□□ 0.37
CTDSP2-204ENST00000548823 ACOD1A6NK06 481 aa17.38■□□□□ 0.37
CTDSP2-204ENST00000548823 CXCL13O43927 109 aa17.38■□□□□ 0.37
CTDSP2-204ENST00000548823 CYTIPO60759 359 aa17.38■□□□□ 0.37
CTDSP2-204ENST00000548823 PTTG1O95997 202 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms