RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 TMEM88Q6PEY1 159 aa8.79□□□□□ -1
SMARCD1-205ENST00000548573 MISPQ8IVT2 679 aa8.79□□□□□ -1
SMARCD1-205ENST00000548573 KDM8Q8N371 416 aa8.79□□□□□ -1
SMARCD1-205ENST00000548573 ZNF441Q8N8Z8 693 aa8.79□□□□□ -1
SMARCD1-205ENST00000548573 ZSCAN4Q8NAM6 433 aaPredicted RBP8.79□□□□□ -1
SMARCD1-205ENST00000548573 MFSD8Q8NHS3 518 aa8.79□□□□□ -1
SMARCD1-205ENST00000548573 SLAMF6Q96DU3 332 aa8.79□□□□□ -1
SMARCD1-205ENST00000548573 TGM7Q96PF1 710 aa8.79□□□□□ -1
SMARCD1-205ENST00000548573 PBOV1Q9GZY1 135 aa8.79□□□□□ -1
SMARCD1-205ENST00000548573 PTGES2Q9H7Z7 377 aa8.79□□□□□ -1
SMARCD1-205ENST00000548573 MMP17Q9ULZ9 603 aa8.79□□□□□ -1
SMARCD1-205ENST00000548573 H0YIZ8 118 aa8.78□□□□□ -1
SMARCD1-205ENST00000548573 KCNAB3O43448 404 aa8.78□□□□□ -1
SMARCD1-205ENST00000548573 SFT2D2O95562 160 aa8.78□□□□□ -1
SMARCD1-205ENST00000548573 HEXAP06865 529 aa8.78□□□□□ -1
SMARCD1-205ENST00000548573 ATXN8OSP0DMR3 200 aa8.78□□□□□ -1
SMARCD1-205ENST00000548573 IL11P20809 199 aa8.78□□□□□ -1
SMARCD1-205ENST00000548573 ZNF93P35789 620 aaPredicted RBP8.78□□□□□ -1
SMARCD1-205ENST00000548573 RFC3P40938 356 aa8.78□□□□□ -1
SMARCD1-205ENST00000548573 EMP2P54851 167 aa8.78□□□□□ -1
SMARCD1-205ENST00000548573 FAM189A2Q15884 450 aa8.78□□□□□ -1
SMARCD1-205ENST00000548573 PLEKHN1Q494U1 663 aaPredicted RBP8.78□□□□□ -1
SMARCD1-205ENST00000548573 C9orf50Q5SZB4 431 aa8.78□□□□□ -1
SMARCD1-205ENST00000548573 FBXO46Q6PJ61 603 aaPredicted RBP8.78□□□□□ -1
SMARCD1-205ENST00000548573 H1FNTQ75WM6 255 aaPredicted RBP8.78□□□□□ -1
SMARCD1-205ENST00000548573 NAA40Q86UY6 237 aa8.78□□□□□ -1
SMARCD1-205ENST00000548573 ANGPTL5Q86XS5 388 aa8.78□□□□□ -1
SMARCD1-205ENST00000548573 OR4A4PQ8NGN8 299 aa8.78□□□□□ -1
SMARCD1-205ENST00000548573 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.78□□□□□ -1
SMARCD1-205ENST00000548573 TMED6Q8WW62 240 aa8.78□□□□□ -1
SMARCD1-205ENST00000548573 SAT2Q96F10 170 aaPredicted RBP8.78□□□□□ -1
SMARCD1-205ENST00000548573 RRNAD1Q96FB5 475 aaKnown RBP8.78□□□□□ -1
SMARCD1-205ENST00000548573 SCGB3A2Q96PL1 93 aa8.78□□□□□ -1
SMARCD1-205ENST00000548573 AQP10Q96PS8 301 aa8.78□□□□□ -1
SMARCD1-205ENST00000548573 LPAR5Q9H1C0 372 aa8.78□□□□□ -1
SMARCD1-205ENST00000548573 TLNRD1Q9H1K6 362 aa8.78□□□□□ -1
SMARCD1-205ENST00000548573 C5orf66Q9H5L9 145 aa8.78□□□□□ -1
SMARCD1-205ENST00000548573 UQCC1Q9NVA1 299 aa8.78□□□□□ -1
SMARCD1-205ENST00000548573 PISDQ9UG56 409 aa8.78□□□□□ -1
SMARCD1-205ENST00000548573 CACNA1CQ13936 2221 aa8.78□□□□□ -1
SMARCD1-205ENST00000548573 IGKV1D-43A0A0B4J1Z2 117 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 A0A1W2PPC4 97 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 PQLC2LA1A4F0 135 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 PCP4L1A6NKN8 68 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 ADAM10O14672 748 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 TRANK1O15050 2925 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 ZNF217O75362 1048 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 FPR2P25090 351 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 EFNA3P52797 238 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 SRSF3P84103 164 aaKnown RBP8.77□□□□□ -1
SMARCD1-205ENST00000548573 HSF1Q00613 529 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 HYAL1Q12794 435 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 MST1LQ2TV78 715 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 PEG10Q86TG7 708 aaKnown RBP8.77□□□□□ -1
SMARCD1-205ENST00000548573 OR10H5Q8NGA6 315 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 NUBPLQ8TB37 319 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 C11orf40Q8WZ69 217 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 ST8SIA1Q92185 356 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 TMEM230Q96A57 120 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 RAB33BQ9H082 229 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 MOB1AQ9H8S9 216 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 FANCFQ9NPI8 374 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 BIN3Q9NQY0 253 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 ZFP57Q9NU63 452 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 DNAJB11Q9UBS4 358 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 LPAR3Q9UBY5 353 aa8.77□□□□□ -1
SMARCD1-205ENST00000548573 FREM3P0C091 2139 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 ANKUB1A6NFN9 424 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 HIST1H1DP16402 221 aaKnown RBP8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 ABOP16442 354 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 APOBEC1P41238 236 aaKnown RBP8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 PPM1FP49593 454 aaPredicted RBP8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 EIF5AP63241 154 aaKnown RBP8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 FOXK1P85037 733 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 POU3F1Q03052 451 aaPredicted RBP8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 NSDHLQ15738 373 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 ZNF528Q3MIS6 628 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 PTCRAQ6ISU1 281 aaPredicted RBP8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 CLEC18BQ6UXF7 455 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 COX15Q7KZN9 410 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 GKN2Q86XP6 184 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 CBLN2Q8IUK8 224 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 WDFY1Q8IWB7 410 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 ZNF101Q8IZC7 436 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 OR13C9Q8NGT0 318 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 KCNG3Q8TAE7 436 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 ADAMTS17Q8TE56 1095 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 ZC3H10Q96K80 434 aaKnown RBP8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 OCSTAMPQ9BR26 566 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 NICN1Q9BSH3 213 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 ADAT1Q9BUB4 502 aaKnown RBP8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 TMEM106CQ9BVX2 250 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 FOXQ1Q9C009 403 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 TREM1Q9NP99 234 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 CHST11Q9NPF2 352 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 KLHL13Q9P2N7 655 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 SRPK3Q9UPE1 567 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 WIF1Q9Y5W5 379 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 FLVCR1Q9Y5Y0 555 aa8.77□□□□□ -1.01
SMARCD1-205ENST00000548573 THADAQ6YHU6 1953 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms